RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 GGA2Q9UJY4 613 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 COL27A1Q8IZC6 1860 aaPredicted RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 A0A1W2PP55 124 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 TYW5A2RUC4 315 aaKnown RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 K7ENP7 123 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 USP12O75317 370 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 RNASEH2AO75792 299 aaKnown RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 KIF20AO95235 890 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 ALPPL2P10696 532 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 GJB2P29033 226 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 RBMS1P29558 406 aaKnown RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 NUDT1P36639 197 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 LSSP48449 732 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 CCR5P51681 352 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 KIF11P52732 1056 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 OVGP1Q12889 678 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 NFATC3Q12968 1075 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 BNIP3Q12983 259 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 ZNF211Q13398 564 aaPredicted RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 CST6Q15828 149 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 PROX2Q3B8N5 592 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 KMT5BQ4FZB7 885 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 C6orf132Q5T0Z8 1188 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 MBLAC2Q68D91 279 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 NAPEPLDQ6IQ20 393 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 INO80CQ6PI98 192 aaPredicted RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 CCDC81Q6ZN84 652 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
PDPN-205ENST00000487038 IQCHQ86VS3 1027 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 CRYBG2Q8N1P7 616 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.98□□□□□ -1.13
PDPN-205ENST00000487038 C12orf29Q8N999 325 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 MFSD2AQ8NA29 543 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 TAF4BQ92750 862 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 CYFIP2Q96F07 1278 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 P2RY11Q96G91 374 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 VCPIP1Q96JH7 1222 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 IMPG2Q9BZV3 1241 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 GZF1Q9H116 711 aaPredicted RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 POLR1BQ9H9Y6 1135 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 AGPAT3Q9NRZ7 376 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 OLA1Q9NTK5 396 aaKnown RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 ABCB8Q9NUT2 735 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 MARCH2Q9P0N8 246 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 CGNQ9P2M7 1197 aaKnown RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 CLEC4EQ9ULY5 219 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 PCDHB1Q9Y5F3 818 aa7.98□□□□□ -1.13
PDPN-205ENST00000487038 UTP20O75691 2785 aaKnown RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 TDRD6O60522 2096 aaKnown RBP7.98□□□□□ -1.13
PDPN-205ENST00000487038 A0A1W2PR77 199 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 SLC12A8A0AV02 714 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 HHLA1C9JL84 531 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 CLIC2O15247 247 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 MID1O15344 667 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 SIGLEC6O43699 453 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 EXOC3O60645 756 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 LATS1O95835 1130 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 ADH1BP00325 375 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 ASLP04424 464 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 GP1BAP07359 652 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 SLFN14P0C7P3 912 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 SLC8A3P57103 927 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 YWHAGP61981 247 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDPN-205ENST00000487038 SGSM1Q2NKQ1 1148 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 KIAA1614Q5VZ46 1190 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 IGF2-ASQ6U949 168 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 XKR5Q6UX68 686 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 ZNF574Q6ZN55 896 aaPredicted RBP7.97□□□□□ -1.13
PDPN-205ENST00000487038 ATG14Q6ZNE5 492 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 PRPF39Q86UA1 669 aaKnown RBP7.97□□□□□ -1.13
PDPN-205ENST00000487038 ADIPOR2Q86V24 386 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 CCDC117Q8IWD4 279 aaPredicted RBP7.97□□□□□ -1.13
PDPN-205ENST00000487038 ZNF516Q92618 1163 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 HPS3Q969F9 1004 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 ARHGAP9Q9BRR9 750 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 NT5C1AQ9BXI3 368 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 IRX2Q9BZI1 471 aaPredicted RBP7.97□□□□□ -1.13
PDPN-205ENST00000487038 TRIM4Q9C037 500 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 ABCG4Q9H172 646 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 SDCBP2Q9H190 292 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 TNMDQ9H2S6 317 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.97□□□□□ -1.13
PDPN-205ENST00000487038 HMGXB4Q9UGU5 601 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 DMTF1Q9Y222 760 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 USP3Q9Y6I4 520 aa7.97□□□□□ -1.13
PDPN-205ENST00000487038 TARSL2A2RTX5 802 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 RIOK3O14730 519 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 SDC3O75056 442 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 SIN3BO75182 1162 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 CSO75390 466 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 RPN1P04843 607 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 SFTPCP11686 197 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 GOT1P17174 413 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 PIK3CAP42336 1068 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 DUSP3P51452 185 aaPredicted RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 ADPRHP54922 357 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 AMPD3Q01432 767 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 STAT4Q14765 748 aa7.96□□□□□ -1.14
PDPN-205ENST00000487038 HNRNPA1L2Q32P51 320 aaKnown RBP7.96□□□□□ -1.14
PDPN-205ENST00000487038 C3orf38Q5JPI3 329 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms