RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 RFWD3Q6PCD5 774 aa20.25■□□□□ 0.83
R3HDM1-215ENST00000483021 CLEC4CQ8WTT0 213 aa20.25■□□□□ 0.83
R3HDM1-215ENST00000483021 MIS12Q9H081 205 aa20.25■□□□□ 0.83
R3HDM1-215ENST00000483021 MIR1-1HGQ9H1L0 117 aa20.25■□□□□ 0.83
R3HDM1-215ENST00000483021 CNTN6Q9UQ52 1028 aa20.25■□□□□ 0.83
R3HDM1-215ENST00000483021 BCAT2O15382 392 aaPredicted RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 FGFR1OPO95684 399 aaKnown RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 TOP3BO95985 862 aaKnown RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 RPL34P49207 117 aaKnown RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 PTPRNQ16849 979 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 ZNF423Q2M1K9 1284 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 TTC31Q49AM3 519 aaPredicted RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 IL27RAQ6UWB1 636 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 BEND5Q7L4P6 421 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 MFN1Q8IWA4 741 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 KDF1Q8NAX2 398 aaPredicted RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 DQX1Q8TE96 717 aaKnown RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 FAM149B1Q96BN6 582 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 KREMEN1Q96MU8 473 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 TMEM121BQ9BXQ6 578 aaPredicted RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 INTS2Q9H0H0 1204 aaKnown RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 ST7Q9NRC1 585 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 TLR6Q9Y2C9 796 aa20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 NYNRINQ9P2P1 1898 aaKnown RBP20.24■□□□□ 0.83
R3HDM1-215ENST00000483021 BIN1O00499 593 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 MED7O43513 233 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 HYAL3O43820 417 aaPredicted RBP20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 CER1O95813 267 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 DNTTP04053 509 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 KRT5P13647 590 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 SLC6A4P31645 630 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 CD70P32970 193 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 GPD2P43304 727 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 ENOSF1Q7L5Y1 443 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 FAM124AQ86V42 546 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 NAXDQ8IW45 347 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 CCDC117Q8IWD4 279 aaPredicted RBP20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 WFDC5Q8TCV5 224 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 STK32AQ8WU08 396 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 GATA6Q92908 595 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 FAM81BQ96LP2 452 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 SUN2Q9UH99 717 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 EIF2B4Q9UI10 523 aaKnown RBP20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 PCDHB9Q9Y5E1 797 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 FAM208BQ5VWN6 2430 aa20.23■□□□□ 0.83
R3HDM1-215ENST00000483021 GOLGA6L7A0A1B0GV03 622 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 ASLP04424 464 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 ZNF883P0CG24 379 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 STX17P56962 302 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 ST8SIA6P61647 398 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 NADSYN1Q6IA69 706 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 SCUBE3Q8IX30 993 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 ZNF366Q8N895 744 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 FIBINQ8TAL6 211 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 FCRL2Q96LA5 508 aaPredicted RBP20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 PRICKLE1Q96MT3 831 aaPredicted RBP20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 SRRTQ9BXP5 876 aaKnown RBP20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 BTBD1Q9H0C5 482 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 PRSS16Q9NQE7 514 aa20.22■□□□□ 0.83
R3HDM1-215ENST00000483021 CAPN9O14815 690 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 SH3BP5O60239 455 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 CALCAP01258 141 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 FYNP06241 537 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 MATKP42679 507 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 RPS14P62263 151 aaKnown RBP20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 CDH18Q13634 790 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 TRIP6Q15654 476 aaKnown RBP20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 ZNF776Q68DI1 518 aaPredicted RBP20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 SNX19Q92543 992 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 SLC39A13Q96H72 371 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 UBE2TQ9NPD8 197 aaPredicted RBP20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 STIM2Q9P246 746 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 ZMIZ1Q9ULJ6 1067 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 SCML1Q9UN30 329 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 NAALADL1Q9UQQ1 740 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 MSRB2Q9Y3D2 182 aa20.21■□□□□ 0.83
R3HDM1-215ENST00000483021 SEMA4FO95754 770 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 APOEP02649 317 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 ACSL1P33121 698 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 AFF3P51826 1226 aaKnown RBP20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 FAM193AP78312 1265 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 MS4A13Q5J8X5 152 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 TAC4Q86UU9 113 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 CARNMT1Q8N4J0 409 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 KDM1BQ8NB78 822 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 C1orf216Q8TAB5 229 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 TTC17Q96AE7 1141 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 LMLNQ96KR4 655 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 MED15Q96RN5 788 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 SLC4A5Q9BY07 1137 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 NUCKS1Q9H1E3 243 aaKnown RBP20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 POPDC2Q9HBU9 364 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 SGK2Q9HBY8 427 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 OSGEPQ9NPF4 335 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 KLK13Q9UKR3 277 aa20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 TP53BP1Q12888 1972 aaPredicted RBP20.2■□□□□ 0.82
R3HDM1-215ENST00000483021 KNL1Q8NG31 2342 aa20.19■□□□□ 0.82
R3HDM1-215ENST00000483021 GADD45BO75293 160 aaPredicted RBP20.19■□□□□ 0.82
R3HDM1-215ENST00000483021 LETM1O95202 739 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms