RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 HNRNPDQ14103 355 aaKnown RBP13.79□□□□□ -0.2
CPSF4-210ENST00000469897 FOXR2Q6PJQ5 311 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 MFN1Q8IWA4 741 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 CARNMT1Q8N4J0 409 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 PNPLA1Q8N8W4 532 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 C1orf216Q8TAB5 229 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 DQX1Q8TE96 717 aaKnown RBP13.79□□□□□ -0.2
CPSF4-210ENST00000469897 SNX19Q92543 992 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 GATA6Q92908 595 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 FAM149B1Q96BN6 582 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 LMLNQ96KR4 655 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 FCRL2Q96LA5 508 aaPredicted RBP13.79□□□□□ -0.2
CPSF4-210ENST00000469897 ZDHHC5Q9C0B5 715 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 GAREM1Q9H706 876 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 ACP6Q9NPH0 428 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 RALYQ9UKM9 306 aaKnown RBP13.79□□□□□ -0.2
CPSF4-210ENST00000469897 CNTN6Q9UQ52 1028 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 MSRB2Q9Y3D2 182 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 NEUROG3Q9Y4Z2 214 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 SLCO1B1Q9Y6L6 691 aa13.79□□□□□ -0.2
CPSF4-210ENST00000469897 KMT2BQ9UMN6 2715 aaPredicted RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 THADAQ6YHU6 1953 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 A0A1B0GVT2 93 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 H0Y626 953 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 KCNK3O14649 394 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 CAPN9O14815 690 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 LETM1O95202 739 aaPredicted RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 TRIM16O95361 564 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 MOCS2O96007 188 aaPredicted RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 ACADSBP45954 432 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 RPL34P49207 117 aaKnown RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 MARSP56192 900 aaKnown RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 PAK1Q13153 545 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 HLA-BQ31612 363 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 FSCBQ5H9T9 825 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 MS4A13Q5J8X5 152 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 GJB7Q6PEY0 223 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 MMS22LQ6ZRQ5 1243 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 NAXDQ8IW45 347 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 SETD7Q8WTS6 366 aaKnown RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 ZNF606Q8WXB4 792 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 TTC17Q96AE7 1141 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 SLC39A13Q96H72 371 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 PRICKLE1Q96MT3 831 aaPredicted RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 SERPINB11Q96P15 392 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 DDX50Q9BQ39 737 aaKnown RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 CRACR2AQ9BSW2 395 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 SLC4A5Q9BY07 1137 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 IRX2Q9BZI1 471 aaPredicted RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 BTBD1Q9H0C5 482 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 NUCKS1Q9H1E3 243 aaKnown RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 XPO7Q9UIA9 1087 aaKnown RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 INTS6Q9UL03 887 aaKnown RBP13.78□□□□□ -0.2
CPSF4-210ENST00000469897 TLR6Q9Y2C9 796 aa13.78□□□□□ -0.2
CPSF4-210ENST00000469897 PAPSS1O43252 624 aaPredicted RBP13.77□□□□□ -0.21
CPSF4-210ENST00000469897 FSBPO95073 299 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 CSKP41240 450 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 MATKP42679 507 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 ST8SIA6P61647 398 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 YWHAZP63104 245 aaKnown RBP13.77□□□□□ -0.21
CPSF4-210ENST00000469897 ZBTB16Q05516 673 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 TAF5Q15542 800 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 DCAF6Q58WW2 860 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 ZC3H12AQ5D1E8 599 aaKnown RBP13.77□□□□□ -0.21
CPSF4-210ENST00000469897 TMEM110Q86TL2 294 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 CCDC117Q8IWD4 279 aaPredicted RBP13.77□□□□□ -0.21
CPSF4-210ENST00000469897 HJURPQ8NCD3 748 aaPredicted RBP13.77□□□□□ -0.21
CPSF4-210ENST00000469897 GANCQ8TET4 914 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 STK32AQ8WU08 396 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 BIRC7Q96CA5 298 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 MYO19Q96H55 970 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 MRGPRX3Q96LB0 322 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 TM7SF3Q9NS93 570 aa13.77□□□□□ -0.21
CPSF4-210ENST00000469897 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.77□□□□□ -0.21
CPSF4-210ENST00000469897 TPRP12270 2363 aaKnown RBP13.76□□□□□ -0.21
CPSF4-210ENST00000469897 FAM221BA6H8Z2 402 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 FAM47DPA6NHR8 397 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 SART1O43290 800 aaKnown RBP13.76□□□□□ -0.21
CPSF4-210ENST00000469897 THAP12O43422 761 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 MED7O43513 233 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 CBFA2T3O75081 653 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 SIN3BO75182 1162 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 SEMA4FO95754 770 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 C7P10643 843 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 SLC9A1P19634 815 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 USP8P40818 1118 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 CTSOP43234 321 aaPredicted RBP13.76□□□□□ -0.21
CPSF4-210ENST00000469897 AFF3P51826 1226 aaKnown RBP13.76□□□□□ -0.21
CPSF4-210ENST00000469897 APBA1Q02410 837 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 CAMK4Q16566 473 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 ZNF423Q2M1K9 1284 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 KIF19Q2TAC6 998 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 RAP1GAP2Q684P5 730 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 IL27RAQ6UWB1 636 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 RAB44Q7Z6P3 723 aaPredicted RBP13.76□□□□□ -0.21
CPSF4-210ENST00000469897 SLCO6A1Q86UG4 719 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 TAC4Q86UU9 113 aa13.76□□□□□ -0.21
CPSF4-210ENST00000469897 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms