RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 FUOMA2VDF0 154 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 APOEP02649 317 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 C4BPAP04003 597 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 GSTT2P0CG29 244 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 GSTT2BP0CG30 244 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 EIF2AK2P19525 551 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 RBL1P28749 1068 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CRHR1P34998 444 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 DMP1Q13316 513 aaPredicted RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 PTPN20Q4JDL3 420 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 BSPRYQ5W0U4 402 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 NANOGP8Q6NSW7 305 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 PACS1Q6VY07 963 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CHST15Q7LFX5 561 aaPredicted RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 ZNF677Q86XU0 584 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 SLC7A5P1Q8MH63 180 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 TMC2Q8TDI7 906 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 EME1Q96AY2 570 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 C12orf43Q96C57 262 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 CMTM5Q96DZ9 223 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 OTUD5Q96G74 571 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CIB1Q99828 191 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 BRD8Q9H0E9 1235 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 RBAKQ9NYW8 714 aaPredicted RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 C6orf203Q9P0P8 240 aaPredicted RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 PI4KBQ9UBF8 816 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 FAM198AQ9UFP1 575 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 RGS17Q9UGC6 210 aaPredicted RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 HTR3EA5X5Y0 456 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 NFIBO00712 420 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CSDE1O75534 798 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 GRAP2O75791 330 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CCNE2O96020 404 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 JUNP05412 331 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 CHRNGP07510 517 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 ZNF26P17031 533 aaPredicted RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 CKMT2P17540 419 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 GABRB3P28472 473 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 LIG4P49917 911 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CDK9P50750 372 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 ROR1Q01973 937 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 CHERPQ8IWX8 916 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 UBR7Q8N806 425 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 DEPDC1BQ8WUY9 529 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 LRTOMTQ8WZ04 291 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 TMA16Q96EY4 203 aaKnown RBP8.16□□□□□ -1.1
TPM3-215ENST00000469717 SLC4A5Q9BY07 1137 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 SLC2A11Q9BYW1 496 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 OSBPL6Q9BZF3 934 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 OLAHQ9NV23 265 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 STK39Q9UEW8 545 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 COQ6Q9Y2Z9 468 aa8.16□□□□□ -1.1
TPM3-215ENST00000469717 ARHGEF37A1IGU5 675 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 ZBTB11O95625 1053 aaPredicted RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 ZNF23P17027 643 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 OSBPP22059 807 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 PHKA2P46019 1235 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 STAT2P52630 851 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 BNIP3Q12983 259 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 MGAT5BQ3V5L5 792 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 FGD3Q5JSP0 725 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 C6orf183Q5T699 404 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 DENND1BQ6P3S1 775 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 PLD6Q8N2A8 252 aaKnown RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 LRRC43Q8N309 656 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 CAMKK2Q96RR4 588 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 NEURL2Q9BR09 285 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 TMEM79Q9BSE2 394 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 SPATA7Q9P0W8 599 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 SFMBT1Q9UHJ3 866 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 CORINQ9Y5Q5 1042 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 NRAPQ86VF7 1730 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 ANKRD12Q6UB98 2062 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 GREB1LQ9C091 1923 aaPredicted RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 PSMD12O00232 456 aaPredicted RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 PLIN3O60664 434 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 KRT38O76015 456 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 MAPTP10636 758 aaKnown RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 MIPP30301 263 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 MAP1SQ66K74 1059 aaPredicted RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 CASC4Q6P4E1 433 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 CYP2R1Q6VVX0 501 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 CCDC80Q76M96 950 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 PQLC3Q8N755 202 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 TMEM102Q8N9M5 508 aaPredicted RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 ISOC1Q96CN7 298 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 PIWIL1Q96J94 861 aaKnown RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 CCDC17Q96LX7 622 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 NLRP4Q96MN2 994 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 KCNK16Q96T55 309 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 NPAS2Q99743 824 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 MAGED2Q9UNF1 606 aaPredicted RBP8.15□□□□□ -1.1
TPM3-215ENST00000469717 WDR37Q9Y2I8 494 aa8.15□□□□□ -1.1
TPM3-215ENST00000469717 RGL2O15211 777 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 STAM2O75886 525 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 METTL18O95568 372 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 EDN1P05305 212 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 HDCP19113 662 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 PRKCHP24723 683 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms