RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 DAPK3O43293 454 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SPOPO43791 374 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 TSPAN3O60637 253 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SRGAP2O75044 1071 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 TULP3O75386 442 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 CLDN11O75508 207 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 LUC7L3O95232 432 aaKnown RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 KAT7O95251 611 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 GJB6O95452 261 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 ATP5BP06576 529 aaKnown RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 KRT7P08729 469 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 CCDC175P0C221 793 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 FECHP22830 423 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 MAN1A1P33908 653 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 HTR7P34969 479 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 ETFBP38117 255 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 NNMTP40261 264 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 ARL4AP40617 200 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 GRIA2P42262 883 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SLC1A1P43005 524 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 VAV2P52735 878 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 VCPP55072 806 aaKnown RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 HDAC4P56524 1084 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 TPI1P60174 286 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 KDSRQ06136 332 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 CCDC173Q0VFZ6 552 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SCAPQ12770 1279 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SLC12A1Q13621 1099 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 AUHQ13825 339 aaKnown RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 DMC1Q14565 340 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 MESDQ14696 234 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 EIF4HQ15056 248 aaKnown RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 C6orf118Q5T5N4 469 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 ERMARDQ5T6L9 678 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 RNF219Q5W0B1 726 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 ASTLQ6HA08 431 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SDE2Q6IQ49 451 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 RWDD4Q6NW29 188 aaKnown RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 RFWD3Q6PCD5 774 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 CHST9Q7L1S5 443 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 BMP8AQ7Z5Y6 402 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 ANKS1BQ7Z6G8 1248 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 PSTKQ8IV42 348 aaKnown RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 MAP7D3Q8IWC1 876 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 LRRC8AQ8IWT6 810 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SYCE1Q8N0S2 351 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 AHI1Q8N157 1196 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 CARNMT1Q8N4J0 409 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 FBXL6Q8N531 539 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 NAT16Q8N8M0 369 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 NIPA2Q8N8Q9 360 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 PJA1Q8NG27 643 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 OLIG1Q8TAK6 271 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 RIN3Q8TB24 985 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SLC35G2Q8TBE7 412 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 KCNV2Q8TDN2 545 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 WFIKKN2Q8TEU8 576 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 CENPIQ92674 756 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 WBP2Q969T9 261 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 ACDQ96AP0 544 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 TBC1D31Q96DN5 1066 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 OSBPL2Q9H1P3 480 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 ZWILCHQ9H900 591 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 PLK2Q9NYY3 685 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 KIAA1522Q9P206 1035 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-206ENST00000462613 OR12D3Q9UGF7 316 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 USP18Q9UMW8 372 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 AP4E1Q9UPM8 1137 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 SLC8A2Q9UPR5 921 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 HS3ST4Q9Y661 456 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 KMT2EQ8IZD2 1858 aa6.59□□□□□ -1.35
SF3B1-206ENST00000462613 BDP1A6H8Y1 2624 aa6.59□□□□□ -1.36
SF3B1-206ENST00000462613 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 TMEM110-MUSTN1A8MSY1 372 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 E9PAM4 449 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 H3BRJ5 948 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 NPC1O15118 1278 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 FGF10O15520 208 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 TIMM44O43615 452 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 CREB3O43889 395 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 GREM1O60565 184 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 GPR37L1O60883 481 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 MTA2O94776 668 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 PROSCO94903 275 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 PENKP01210 267 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 POLR2EP19388 210 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 TFE3P19532 575 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 AOC1P19801 751 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 CD72P21854 359 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 MSNP26038 577 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 HOXD9P28356 352 aaPredicted RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 MIPP30301 263 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 OR1E1P30953 314 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 SLC6A4P31645 630 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 L1CAMP32004 1257 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 GJC1P36383 396 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 CETN2P41208 172 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 TNFRSF4P43489 277 aa6.58□□□□□ -1.36
SF3B1-206ENST00000462613 RPS9P46781 194 aaKnown RBP6.58□□□□□ -1.36
SF3B1-206ENST00000462613 SOX9P48436 509 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms