RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 LMLNQ96KR4 655 aa19.62■□□□□ 0.73
COL5A1-203ENST00000460264 TMEM245Q9H330 911 aa19.62■□□□□ 0.73
COL5A1-203ENST00000460264 FAM204AQ9H8W3 233 aa19.62■□□□□ 0.73
COL5A1-203ENST00000460264 TMEM74BQ9NUR3 256 aa19.62■□□□□ 0.73
COL5A1-203ENST00000460264 CEP83Q9Y592 693 aa19.62■□□□□ 0.73
COL5A1-203ENST00000460264 NYNRINQ9P2P1 1898 aaKnown RBP19.62■□□□□ 0.73
COL5A1-203ENST00000460264 ATXN2Q99700 1313 aaKnown RBP19.61■□□□□ 0.73
COL5A1-203ENST00000460264 GRAP2O75791 330 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 CYP11B1P15538 503 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 ITPKAP23677 461 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 CDK17Q00537 523 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 KRT31Q15323 416 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 PTPRNQ16849 979 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 FNDC3BQ53EP0 1204 aaKnown RBP19.61■□□□□ 0.73
COL5A1-203ENST00000460264 PEAR1Q5VY43 1037 aaPredicted RBP19.61■□□□□ 0.73
COL5A1-203ENST00000460264 MBLAC2Q68D91 279 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 METTL3Q86U44 580 aaKnown RBP19.61■□□□□ 0.73
COL5A1-203ENST00000460264 DEFB106AQ8N104 65 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 DEFB119Q8N690 84 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 FIBINQ8TAL6 211 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 BTN2A3PQ96KV6 586 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 USP36Q9P275 1121 aaKnown RBP19.61■□□□□ 0.73
COL5A1-203ENST00000460264 EVLQ9UI08 416 aaPredicted RBP19.61■□□□□ 0.73
COL5A1-203ENST00000460264 PILRBQ9UKJ0 227 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 ADAMTS9Q9P2N4 1935 aa19.61■□□□□ 0.73
COL5A1-203ENST00000460264 F8VZ95 297 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 TM4SF5O14894 197 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 DAB1O75553 588 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 DLDP09622 509 aaKnown RBP19.6■□□□□ 0.73
COL5A1-203ENST00000460264 HLA-EP13747 358 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 CDH5P33151 784 aaPredicted RBP19.6■□□□□ 0.73
COL5A1-203ENST00000460264 HOXD12P35452 270 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 DPP6P42658 865 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 COPAP53621 1224 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 SNX16P57768 344 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 ZNF33AQ06730 810 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 LMAN2Q12907 356 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 CAMK2GQ13555 558 aaPredicted RBP19.6■□□□□ 0.73
COL5A1-203ENST00000460264 PPM1JQ5JR12 505 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 RAP1GAP2Q684P5 730 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 OR6B2Q6IFH4 312 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 SLC26A9Q7LBE3 791 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 CHSY1Q86X52 802 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 TMPRSS6Q8IU80 811 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 SLC41A1Q8IVJ1 513 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 LGI2Q8N0V4 545 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 CFAP52Q8N1V2 620 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 DDX1Q92499 740 aaKnown RBP19.6■□□□□ 0.73
COL5A1-203ENST00000460264 STK33Q9BYT3 514 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 VPS16Q9H269 839 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 GANQ9H2C0 597 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 SYNCQ9H7C4 482 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 DDIT4Q9NX09 232 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 PLA2G4CQ9UP65 541 aa19.6■□□□□ 0.73
COL5A1-203ENST00000460264 PCDH15Q96QU1 1955 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 LUC7L3O95232 432 aaKnown RBP19.59■□□□□ 0.73
COL5A1-203ENST00000460264 ATP5BP06576 529 aaKnown RBP19.59■□□□□ 0.73
COL5A1-203ENST00000460264 SLC2A3P11169 496 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 POLR2EP19388 210 aaKnown RBP19.59■□□□□ 0.73
COL5A1-203ENST00000460264 TACR2P21452 398 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 CD6P30203 668 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 IRX4P78413 519 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 SLC6A3Q01959 620 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 CDH18Q13634 790 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 STX1AQ16623 288 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 TRIM61Q5EBN2 209 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 SASS6Q6UVJ0 657 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 CACUL1Q86Y37 369 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 CARNMT1Q8N4J0 409 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 ZNF366Q8N895 744 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 ATP6V0D2Q8N8Y2 350 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 TMEM35BQ8NCS4 154 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 OR2T3Q8NH03 318 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 PRCCQ92733 491 aaPredicted RBP19.59■□□□□ 0.73
COL5A1-203ENST00000460264 SIPA1Q96FS4 1042 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 HSPA12BQ96MM6 686 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 ITM2CQ9NQX7 267 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 ANO10Q9NW15 660 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 FANCLQ9NW38 375 aa19.59■□□□□ 0.73
COL5A1-203ENST00000460264 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.59■□□□□ 0.73
COL5A1-203ENST00000460264 SYNJ2BP-COX16A0A087WUM0 186 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 KCNU1A8MYU2 1149 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 NDUFS2O75306 463 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 MBD3O95983 291 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 IGLV3-19P01714 112 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 CCR1P32246 355 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 KLK7P49862 253 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 TPMTP51580 245 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 FSCBQ5H9T9 825 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 TAF3Q5VWG9 929 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 NOP9Q86U38 636 aaKnown RBP19.58■□□□□ 0.72
COL5A1-203ENST00000460264 ZDHHC17Q8IUH5 632 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 ZNF397Q8NF99 534 aaPredicted RBP19.58■□□□□ 0.72
COL5A1-203ENST00000460264 EPS8L1Q8TE68 723 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 PRMT1Q99873 361 aaKnown RBP19.58■□□□□ 0.72
COL5A1-203ENST00000460264 PDCL3Q9H2J4 239 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 COX16Q9P0S2 106 aa19.58■□□□□ 0.72
COL5A1-203ENST00000460264 INTS6Q9UL03 887 aaKnown RBP19.58■□□□□ 0.72
COL5A1-203ENST00000460264 C4orf47A7E2U8 309 aa19.57■□□□□ 0.72
COL5A1-203ENST00000460264 F5H5T6 163 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms