RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TRIP11Q15643 1979 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 PLOD2O00469 737 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 FAM189A1O60320 539 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 ABCG1P45844 678 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 PRAMEP78395 509 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 EML3Q32P44 896 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 TMEM198Q66K66 360 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 KRT80Q6KB66 452 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 SWSAP1Q6NVH7 229 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 ZBTB33Q86T24 672 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 CATSPER1Q8NEC5 780 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 SLC35B4Q969S0 331 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 CGRRF1Q99675 332 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 HAUS8Q9BT25 410 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 OSBPL6Q9BZF3 934 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 COQ10BQ9H8M1 238 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 COPG2Q9UBF2 871 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.32□□□□□ -0.12
VPS52-212ENST00000445902 PORP16435 677 aaPredicted RBP14.32□□□□□ -0.12
VPS52-212ENST00000445902 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 RXRGP48443 463 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 HSD17B4P51659 736 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 USP41Q3LFD5 358 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 CES3Q6UWW8 571 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 ATP2A3Q93084 1043 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 SLC2A11Q9BYW1 496 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 PAIP1Q9H074 479 aaKnown RBP14.32□□□□□ -0.12
VPS52-212ENST00000445902 RMI1Q9H9A7 625 aa14.32□□□□□ -0.12
VPS52-212ENST00000445902 ENTPD3O75355 529 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 SERPINB9P50453 376 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 MGAT5BQ3V5L5 792 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 PIGGQ5H8A4 983 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 SLC9A4Q6AI14 798 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 CHERPQ8IWX8 916 aaKnown RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 PQLC3Q8N755 202 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 PDCD6IPQ8WUM4 868 aaKnown RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 GFM2Q969S9 779 aaKnown RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 IDI2Q9BXS1 227 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 GCOM2Q9BZD3 368 aaPredicted RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 NUF2Q9BZD4 464 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 TCF7L2Q9NQB0 619 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 RGPD3A6NKT7 1758 aaPredicted RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 RGPD4Q7Z3J3 1758 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 TCP10L2B9ZVM9 353 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 TYK2P29597 1187 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 BTG3Q14201 252 aaPredicted RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 EPGNQ6UW88 154 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 PLD5Q8N7P1 536 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 CDC14AQ9UNH5 594 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 TMX2Q9Y320 296 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 H6PDO95479 791 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 MYL4P12829 197 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 POLR2BP30876 1174 aaKnown RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 BCAR1P56945 870 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 SESN2P58004 480 aaPredicted RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 CTBSQ01459 385 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 GSTM4Q03013 218 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 ATP1A4Q13733 1029 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 FAM102AQ5T9C2 384 aaPredicted RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 NXNQ6DKJ4 435 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 OGFOD2Q6N063 350 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 C16orf89Q6UX73 402 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 XYLT1Q86Y38 959 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 PLD6Q8N2A8 252 aaKnown RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 TMEM102Q8N9M5 508 aaPredicted RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 TDRD5Q8NAT2 981 aaKnown RBP14.31□□□□□ -0.12
VPS52-212ENST00000445902 NETO2Q8NC67 525 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 LRTOMTQ8WZ04 291 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 ABHD8Q96I13 439 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 RANBP9Q96S59 729 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 CDH19Q9H159 772 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 TRPV6Q9H1D0 765 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 WDR41Q9HAD4 459 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 FZD1Q9UP38 647 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 PCDHA11Q9Y5I1 949 aa14.31□□□□□ -0.12
VPS52-212ENST00000445902 PRSS51A0A1B0GVH4 220 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 ASS1P00966 412 aaKnown RBP14.3□□□□□ -0.12
VPS52-212ENST00000445902 CHRNGP07510 517 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 CPA3P15088 417 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 ZNF26P17031 533 aaPredicted RBP14.3□□□□□ -0.12
VPS52-212ENST00000445902 GRK2P25098 689 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 JAK3P52333 1124 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 CDH8P55286 799 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 DGKZQ13574 1117 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 NPAS2Q99743 824 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 ACO2Q99798 780 aaKnown RBP14.3□□□□□ -0.12
VPS52-212ENST00000445902 CIB1Q99828 191 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 FERMT1Q9BQL6 677 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 PCDHAC1Q9H158 963 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 RAVER2Q9HCJ3 691 aaKnown RBP14.3□□□□□ -0.12
VPS52-212ENST00000445902 CYP26B1Q9NR63 512 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 TBCCD1Q9NVR7 557 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 MPSTP25325 297 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 OXCT1P55809 520 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 PHEXP78562 749 aa14.3□□□□□ -0.12
VPS52-212ENST00000445902 RELAQ04206 551 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms