RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 FAM43BQ6ZT52 329 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-208ENST00000430669 CDC26Q8NHZ8 85 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 MDM1Q8TC05 714 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 RNF157Q96PX1 679 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 ING2Q9H160 280 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 RBM22Q9NW64 420 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTCH1-208ENST00000430669 EEF1B2P24534 225 aaKnown RBP11.82□□□□□ -0.52
PTCH1-208ENST00000430669 NOMO2Q5JPE7 1267 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 SPDYAQ5MJ70 313 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 BBS12Q6ZW61 710 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 RIN3Q8TB24 985 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 SLC26A7Q8TE54 656 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 WDR81Q562E7 1941 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 ELK3P41970 407 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 RAD23BP54727 409 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 MIB1Q86YT6 1006 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 DEFB106AQ8N104 65 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 IRGQQ8WZA9 623 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 SH3KBP1Q96B97 665 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 KREMEN1Q96MU8 473 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 FAM105AQ9NUU6 356 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 IRAK4Q9NWZ3 460 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 FGF19O95750 216 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 PLEKHA7Q6IQ23 1121 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTCH1-208ENST00000430669 IPPQ9Y573 584 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 PQBP1O60828 265 aaKnown RBP11.82□□□□□ -0.52
PTCH1-208ENST00000430669 YBX3P16989 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTCH1-208ENST00000430669 VPS37AQ8NEZ2 397 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 CYP4F11Q9HBI6 524 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 PKD2L2Q9NZM6 624 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 THRAP10827 490 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 VCLP18206 1134 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 BDNFP23560 247 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 MAPK1P28482 360 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 WSCD1Q658N2 575 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 CCDC149Q6ZUS6 474 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 BATF3Q9NR55 127 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 SEPT3Q9UH03 358 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 ACOT9Q9Y305 439 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 XYLBO75191 536 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 CILPO75339 1184 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 JCHAINP01591 159 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 NIPA2Q8N8Q9 360 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 POLR1EQ9GZS1 481 aaKnown RBP11.82□□□□□ -0.52
PTCH1-208ENST00000430669 PDZD7Q9H5P4 517 aa11.82□□□□□ -0.52
PTCH1-208ENST00000430669 RNASEH1O60930 286 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 RFC1P35251 1148 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 SLC39A12Q504Y0 691 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 OTUB1Q96FW1 271 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 UTP6Q9NYH9 597 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 OR12D3Q9UGF7 316 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 FAM153AQ9UHL3 310 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 VPS28Q9UK41 221 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 ST3GAL5Q9UNP4 418 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 ATP5C1P36542 298 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 MMP13P45452 471 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 CD151P48509 253 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 PRMT9Q6P2P2 845 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 CXCL17Q6UXB2 119 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 HASPINQ8TF76 798 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 IARS2Q9NSE4 1012 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 COQ4Q9Y3A0 265 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 Q9Y3F1 56 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 ZSCAN5CA6NGD5 496 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 TMEM88BA6NKF7 163 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 CDH2P19022 906 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 PPM1AP35813 382 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 KCNK10P57789 538 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 CACHD1Q5VU97 1274 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 LRRC34Q8IZ02 419 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 THG1LQ9NWX6 298 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 NINJ2Q9NZG7 142 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 PLXNA1Q9UIW2 1896 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 SCTRP47872 440 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 LYPLAL1Q5VWZ2 237 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 VSTM1Q6UX27 236 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 CARNMT1Q8N4J0 409 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 COPS5Q92905 334 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 KAT5Q92993 513 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 FICDQ9BVA6 458 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 TMEM39AQ9NV64 488 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 CHRM3P20309 590 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 MRPS5P82675 430 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 LBRQ14739 615 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 SNX31Q8N9S9 440 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 OR5B17Q8NGF7 314 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 STN1Q9H668 368 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 RAD18Q9NS91 495 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 MARCH2Q9P0N8 246 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 SORCS3Q9UPU3 1222 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 FAM153BP0C7A2 387 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms