RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 GPD2P43304 727 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 ACADSBP45954 432 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 MTIF2P46199 727 aaKnown RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 RPS24P62847 133 aaKnown RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 GRIK2Q13002 908 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 SEMA3BQ13214 749 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 ENPP2Q13822 863 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 FAM133BQ5BKY9 247 aaKnown RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 TAC4Q86UU9 113 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 ADIPOR2Q86V24 386 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 PASD1Q8IV76 773 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 LGI2Q8N0V4 545 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 WFDC5Q8TCV5 224 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 SETD7Q8WTS6 366 aaKnown RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 CAMK1GQ96NX5 476 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 SCNM1Q9BWG6 230 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 NUCKS1Q9H1E3 243 aaKnown RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 MTG2Q9H4K7 406 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 ACP6Q9NPH0 428 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 TJP2Q9UDY2 1190 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 STOML2Q9UJZ1 356 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 TLR6Q9Y2C9 796 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 E5RJQ4 531 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
TTC3-208ENST00000428693 BCAT2O15382 392 aaPredicted RBP12.47□□□□□ -0.41
TTC3-208ENST00000428693 SH3BP5O60239 455 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 FSBPO95073 299 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 MOCS3O95396 460 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 SLC9A1P19634 815 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 CSKP41240 450 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 APBA1Q02410 837 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 TTC31Q49AM3 519 aaPredicted RBP12.47□□□□□ -0.41
TTC3-208ENST00000428693 ZC3H12AQ5D1E8 599 aaKnown RBP12.47□□□□□ -0.41
TTC3-208ENST00000428693 SYPL2Q5VXT5 272 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
TTC3-208ENST00000428693 RAP1GAP2Q684P5 730 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 NADSYN1Q6IA69 706 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 UNQ6494/PRO21346Q6UXR6 183 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 GBP6Q6ZN66 633 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 MMS22LQ6ZRQ5 1243 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 CHSY1Q86X52 802 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 CADM4Q8NFZ8 388 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 ZNF606Q8WXB4 792 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
TTC3-208ENST00000428693 MED15Q96RN5 788 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 TRIM62Q9BVG3 475 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 ADAM33Q9BZ11 813 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 C6orf106Q9H6K1 298 aaPredicted RBP12.47□□□□□ -0.41
TTC3-208ENST00000428693 GAREM1Q9H706 876 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 SYNCQ9H7C4 482 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 FAM204AQ9H8W3 233 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 PRSS16Q9NQE7 514 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 KIAA1468Q9P260 1216 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 SUN2Q9UH99 717 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 SLC12A6Q9UHW9 1150 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 NUMA1Q14980 2115 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
TTC3-208ENST00000428693 CKAP5Q14008 2032 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 FAM170AA1A519 330 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 RNASEH1O60930 286 aaKnown RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 GRAP2O75791 330 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 SEMA4FO95754 770 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 IGLV3-27P01718 113 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 FYNP06241 537 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 ACSL1P33121 698 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 CSNK1EP49674 416 aaKnown RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 MARSP56192 900 aaKnown RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 UBE2HP62256 183 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 FAM193AP78312 1265 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 RING1Q06587 406 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 CAMK2GQ13555 558 aaPredicted RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 PTPRNQ16849 979 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 EXOC3L4Q17RC7 722 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 DCAF6Q58WW2 860 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 MPP7Q5T2T1 576 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 ZNF776Q68DI1 518 aaPredicted RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 TRIM65Q6PJ69 517 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 LRSAM1Q6UWE0 723 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 ENOSF1Q7L5Y1 443 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 ADAT2Q7Z6V5 191 aaKnown RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 PIP4P1Q86T03 277 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 DHX40Q8IX18 779 aaKnown RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 ZNF557Q8N988 423 aaPredicted RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 MYEOVQ96EZ4 313 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 PRICKLE1Q96MT3 831 aaPredicted RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 BTBD1Q9H0C5 482 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 PDCL3Q9H2J4 239 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 TMEM245Q9H330 911 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 POPDC2Q9HBU9 364 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 XPO7Q9UIA9 1087 aaKnown RBP12.46□□□□□ -0.41
TTC3-208ENST00000428693 NCKAP1Q9Y2A7 1128 aa12.46□□□□□ -0.41
TTC3-208ENST00000428693 USP24Q9UPU5 2620 aa12.46□□□□□ -0.42
TTC3-208ENST00000428693 KNL1Q8NG31 2342 aa12.45□□□□□ -0.42
TTC3-208ENST00000428693 KMT2BQ9UMN6 2715 aaPredicted RBP12.45□□□□□ -0.42
TTC3-208ENST00000428693 A0A1B0GVT2 93 aa12.45□□□□□ -0.42
TTC3-208ENST00000428693 GOLGA8CPA6NN73 597 aa12.45□□□□□ -0.42
TTC3-208ENST00000428693 PAPSS1O43252 624 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms