RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 P2RY11Q96G91 374 aa18.29■□□□□ 0.52
CDK11A-208ENST00000404249 HSFY1Q96LI6 401 aa18.29■□□□□ 0.52
CDK11A-208ENST00000404249 CEP41Q9BYV8 373 aa18.29■□□□□ 0.52
CDK11A-208ENST00000404249 C1orf21Q9H246 121 aa18.29■□□□□ 0.52
CDK11A-208ENST00000404249 STN1Q9H668 368 aaKnown RBP18.29■□□□□ 0.52
CDK11A-208ENST00000404249 SYBUQ9NX95 663 aa18.29■□□□□ 0.52
CDK11A-208ENST00000404249 TUBP50607 506 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 EFHC1Q5JVL4 640 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 FBXO47Q5MNV8 452 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 TMEM154Q6P9G4 183 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 ADAMTS10Q9H324 1103 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 SNX25Q9H3E2 840 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 NXF3Q9H4D5 531 aaKnown RBP18.28■□□□□ 0.52
CDK11A-208ENST00000404249 SEPT10Q9P0V9 454 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 DCDC2Q9UHG0 476 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 SLC7A8Q9UHI5 535 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 UBQLN1Q9UMX0 589 aaKnown RBP18.28■□□□□ 0.52
CDK11A-208ENST00000404249 UTRNP46939 3433 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 MEI4A8MW99 385 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 RECQL4O94761 1208 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 SERPINE1P05121 402 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 GLUD2P49448 558 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 LBRQ14739 615 aaKnown RBP18.28■□□□□ 0.52
CDK11A-208ENST00000404249 SMAD1Q15797 465 aaKnown RBP18.28■□□□□ 0.52
CDK11A-208ENST00000404249 SLC25A52Q3SY17 297 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 RNF139Q8WU17 664 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 UCMAQ8WVF2 138 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 FAM149B1Q96BN6 582 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 NAT9Q9BTE0 207 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 FAM49AQ9H0Q0 323 aaPredicted RBP18.28■□□□□ 0.52
CDK11A-208ENST00000404249 SLC24A3Q9HC58 644 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 KRT82Q9NSB4 513 aa18.28■□□□□ 0.52
CDK11A-208ENST00000404249 DAB1O75553 588 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 PROCP04070 461 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 ACTR3P61158 418 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 PDE1BQ01064 536 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 RABGAP1LQ5R372 815 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 ZNF618Q5T7W0 954 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 OTUD1Q5VV17 481 aaPredicted RBP18.27■□□□□ 0.52
CDK11A-208ENST00000404249 NOTUMQ6P988 496 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 ALKAL1Q6UXT8 129 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 MYLK4Q86YV6 388 aaPredicted RBP18.27■□□□□ 0.52
CDK11A-208ENST00000404249 PSTKQ8IV42 348 aaKnown RBP18.27■□□□□ 0.52
CDK11A-208ENST00000404249 NDRG1Q92597 394 aaKnown RBP18.27■□□□□ 0.52
CDK11A-208ENST00000404249 FERMT1Q9BQL6 677 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 PRDM16Q9HAZ2 1276 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 TMPRSS4Q9NRS4 437 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.27■□□□□ 0.52
CDK11A-208ENST00000404249 SOX13Q9UN79 622 aa18.27■□□□□ 0.52
CDK11A-208ENST00000404249 SPTLC1O15269 473 aa18.27■□□□□ 0.51
CDK11A-208ENST00000404249 UPP2O95045 317 aa18.27■□□□□ 0.51
CDK11A-208ENST00000404249 PRKCGP05129 697 aa18.27■□□□□ 0.51
CDK11A-208ENST00000404249 TKTP29401 623 aaKnown RBP18.27■□□□□ 0.51
CDK11A-208ENST00000404249 KBTBD2Q8IY47 623 aa18.27■□□□□ 0.51
CDK11A-208ENST00000404249 PGBD4Q96DM1 585 aa18.27■□□□□ 0.51
CDK11A-208ENST00000404249 ZNF560Q96MR9 790 aa18.27■□□□□ 0.51
CDK11A-208ENST00000404249 SYT15Q9BQS2 421 aa18.27■□□□□ 0.51
CDK11A-208ENST00000404249 KATNBL1Q9H079 304 aa18.27■□□□□ 0.51
CDK11A-208ENST00000404249 SF3B1O75533 1304 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDK11A-208ENST00000404249 KPNA7A9QM74 516 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 PIRO00625 290 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 C6orf222P0C671 652 aaPredicted RBP18.26■□□□□ 0.51
CDK11A-208ENST00000404249 ANPEPP15144 967 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 AKAP5P24588 427 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 CPOXP36551 454 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 PITX1P78337 314 aaPredicted RBP18.26■□□□□ 0.51
CDK11A-208ENST00000404249 ADIGQ0VDE8 80 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 PDK1Q15118 436 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 C1orf146Q5VVC0 180 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 C10orf107Q8IVU9 208 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 ZNF567Q8N184 647 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 CCNYQ8ND76 341 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 PPP4R1Q8TF05 950 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 CDCA5Q96FF9 252 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 ZNF184Q99676 751 aaPredicted RBP18.26■□□□□ 0.51
CDK11A-208ENST00000404249 IL1RAPL1Q9NZN1 696 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 APOBEC2Q9Y235 224 aaKnown RBP18.26■□□□□ 0.51
CDK11A-208ENST00000404249 SBF1O95248 1867 aa18.26■□□□□ 0.51
CDK11A-208ENST00000404249 SYNJ2BP-COX16A0A087WUM0 186 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 XPO1O14980 1071 aaKnown RBP18.25■□□□□ 0.51
CDK11A-208ENST00000404249 MMP3P08254 477 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 INSCQ1MX18 579 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 DCAF6Q58WW2 860 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 MAVSQ7Z434 540 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 SORT1Q99523 831 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 YIPF3Q9GZM5 350 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 CDHR5Q9HBB8 845 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 SETD4Q9NVD3 440 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 COX16Q9P0S2 106 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 TXNDC16Q9P2K2 825 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 PPP1R12AO14974 1030 aaPredicted RBP18.25■□□□□ 0.51
CDK11A-208ENST00000404249 CREB3O43889 395 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 CD4P01730 458 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 ERVK-10P10266 1014 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 GRK2P25098 689 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 GP5P40197 560 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 GARSP41250 739 aaKnown RBP18.25■□□□□ 0.51
CDK11A-208ENST00000404249 ERFP50548 548 aa18.25■□□□□ 0.51
CDK11A-208ENST00000404249 CCNHP51946 323 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms