RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ORAI3Q9BRQ5 295 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 BTBD1Q9H0C5 482 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 FBRSQ9HAH7 460 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 CNGB3Q9NQW8 809 aa14.36□□□□□ -0.11
CXCL12-202ENST00000374426 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.36□□□□□ -0.11
CXCL12-202ENST00000374426 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 KCNK3O14649 394 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 FSBPO95073 299 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 IGLV3-27P01718 113 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 DNTTP04053 509 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 ATP5BP06576 529 aaKnown RBP14.35□□□□□ -0.11
CXCL12-202ENST00000374426 SETSIPP0DME0 302 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 VDRP11473 427 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 LCP1P13796 627 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 CD27P26842 260 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 CD70P32970 193 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 PRCPP42785 496 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 SUZ12Q15022 739 aaKnown RBP14.35□□□□□ -0.11
CXCL12-202ENST00000374426 TEAD4Q15561 434 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 COL28A1Q2UY09 1125 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 FAM133BQ5BKY9 247 aaKnown RBP14.35□□□□□ -0.11
CXCL12-202ENST00000374426 MPP7Q5T2T1 576 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 PIK3R6Q5UE93 754 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 MSANTD2Q6P1R3 559 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 PDZD3Q86UT5 571 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 TFAP2BQ92481 460 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 IGSF8Q969P0 613 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 LMLNQ96KR4 655 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 MTG2Q9H4K7 406 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 RAXQ9Y2V3 346 aa14.35□□□□□ -0.11
CXCL12-202ENST00000374426 TMEM131Q92545 1883 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 GOLGA8CPA6NN73 597 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 H0Y8X5 98 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 SLC16A3O15427 465 aaKnown RBP14.34□□□□□ -0.11
CXCL12-202ENST00000374426 PCDHGA12O60330 932 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 TBL1XO60907 577 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 IGHV4-34P06331 123 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 POLR2EP19388 210 aaKnown RBP14.34□□□□□ -0.11
CXCL12-202ENST00000374426 SLC6A4P31645 630 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 PMS1P54277 932 aaKnown RBP14.34□□□□□ -0.11
CXCL12-202ENST00000374426 YWHAEP62258 255 aaKnown RBP14.34□□□□□ -0.11
CXCL12-202ENST00000374426 LRMPQ12912 555 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 TTC31Q49AM3 519 aaPredicted RBP14.34□□□□□ -0.11
CXCL12-202ENST00000374426 ZNF776Q68DI1 518 aaPredicted RBP14.34□□□□□ -0.11
CXCL12-202ENST00000374426 PMF1Q6P1K2 205 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 LCLAT1Q6UWP7 414 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 SLC35F5Q8WV83 523 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 GOLGA1Q92805 767 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 SLC35C1Q96A29 364 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 MYO19Q96H55 970 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 RSPH9Q9H1X1 276 aaPredicted RBP14.34□□□□□ -0.11
CXCL12-202ENST00000374426 SGK2Q9HBY8 427 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 DKK4Q9UBT3 224 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
CXCL12-202ENST00000374426 HELZ2Q9BYK8 2649 aaKnown RBP14.33□□□□□ -0.11
CXCL12-202ENST00000374426 PIK3R2O00459 728 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 IRAK2O43187 625 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 TNFSF14O43557 240 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 ACSL4O60488 711 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 CTSKP43235 329 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 GRK6P43250 576 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 SLC11A2P49281 568 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 RGS7P49802 495 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 CCT8P50990 548 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 FKBP3Q00688 224 aaKnown RBP14.33□□□□□ -0.12
CXCL12-202ENST00000374426 PNOCQ13519 176 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 CAMK2BQ13554 666 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 SOWAHCQ53LP3 525 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-202ENST00000374426 NUGGCQ68CJ6 796 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 ANKRD40Q6AI12 368 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 NADSYN1Q6IA69 706 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 UNC45BQ8IWX7 931 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 CLEC4CQ8WTT0 213 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 IRGQQ8WZA9 623 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 MYEOVQ96EZ4 313 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 PRICKLE1Q96MT3 831 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-202ENST00000374426 IRX2Q9BZI1 471 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-202ENST00000374426 SCAND2PQ9GZW5 306 aaPredicted RBP14.33□□□□□ -0.12
CXCL12-202ENST00000374426 PABPC3Q9H361 631 aaKnown RBP14.33□□□□□ -0.12
CXCL12-202ENST00000374426 SERGEFQ9UGK8 458 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 SUN2Q9UH99 717 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 INTS6Q9UL03 887 aaKnown RBP14.33□□□□□ -0.12
CXCL12-202ENST00000374426 KALRNO60229 2985 aa14.33□□□□□ -0.12
CXCL12-202ENST00000374426 FAM149AA5PLN7 773 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 TRABD2BA6NFA1 517 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 LTFP02788 710 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 PAEPP09466 180 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 TBXAS1P24557 533 aaPredicted RBP14.32□□□□□ -0.12
CXCL12-202ENST00000374426 TBX4P57082 545 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 IL9RQ01113 521 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 SMAD1Q15797 465 aaKnown RBP14.32□□□□□ -0.12
CXCL12-202ENST00000374426 HNRNPA1L2Q32P51 320 aaKnown RBP14.32□□□□□ -0.12
CXCL12-202ENST00000374426 COBLL1Q53SF7 1204 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 KIAA0895LQ68EN5 471 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 TMEM270Q6UE05 265 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 USP30Q70CQ3 517 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 MFN1Q8IWA4 741 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 GALNT15Q8N3T1 639 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 FIBINQ8TAL6 211 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms