RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TSPY3P0CV98 308 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 TSPY8P0CW00 308 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 ADCY7P51828 1080 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 GDF10P55107 478 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 TSPY1Q01534 308 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 MAMDC4Q6UXC1 1216 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 HEATR4Q86WZ0 1026 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 TRIB2Q92519 343 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 LENG8Q96PV6 779 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 ZNF347Q96SE7 839 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 FIZ1Q96SL8 496 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 SLC39A3Q9BRY0 314 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 IMPG2Q9BZV3 1241 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 DRG1Q9Y295 367 aaKnown RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 ATP11BQ9Y2G3 1177 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 GJA3Q9Y6H8 435 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 PI4K2BG5E9Z4 385 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 NOP56O00567 594 aaKnown RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 UFL1O94874 794 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 NCF2P19878 526 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 FGFR3P22607 806 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 GRSF1Q12849 480 aaKnown RBP eCLIP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 NFX1Q12986 1120 aaKnown RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 DPYSQ14117 519 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 C1orf220Q5T0J3 134 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 ATAD3BQ5T9A4 648 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 CCSAPQ6IQ19 270 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 NEDD1Q8NHV4 660 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 PDCD6IPQ8WUM4 868 aaKnown RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 ATP6V1E2Q96A05 226 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 SH3YL1Q96HL8 342 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 C1orf50Q9BV19 199 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 TRIT1Q9H3H1 467 aaKnown RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 CNGB3Q9NQW8 809 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 PNPOQ9NVS9 261 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 MCM9Q9NXL9 1143 aa9.8□□□□□ -0.84
SF3A3-201ENST00000373019 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 PRPF19Q9UMS4 504 aaKnown RBP9.8□□□□□ -0.84
SF3A3-201ENST00000373019 DLGAP1O14490 977 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 HOXC11O43248 304 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 AKAP10O43572 662 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 PSTPIP1O43586 416 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 MARCH6O60337 910 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 GMNNO75496 209 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 BCAS2O75934 225 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 PROSCO94903 275 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 KCNH1O95259 989 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 INHBAP08476 426 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 TCF4P15884 667 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 MAPK10P53779 464 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 PKNOX1P55347 436 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 KRT76Q01546 638 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 TRIM71Q2Q1W2 868 aaKnown RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 LDLRAP1Q5SW96 308 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 TMTC4Q5T4D3 741 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 C12orf60Q5U649 245 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 OSTM1Q86WC4 334 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 ZNF354CQ86Y25 554 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 NATD1Q8N6N6 113 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 UBR7Q8N806 425 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 SLC44A5Q8NCS7 719 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 LRTOMTQ8WZ04 291 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CSF3RQ99062 836 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 SORT1Q99523 831 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 PCDH9Q9HC56 1237 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CD209Q9NNX6 404 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 AGPAT3Q9NRZ7 376 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 VPS28Q9UK41 221 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 SCN7AQ01118 1682 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 ILVBLA1L0T0 632 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 IFNB1P01574 187 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 MCF2P10911 925 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 ENPP1P22413 925 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CSE1LP55060 971 aaKnown RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CTAG1AP78358 180 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CRY1Q16526 586 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 BBS9Q3SYG4 887 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CAVIN4Q5BKX8 364 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CYP4A22Q5TCH4 519 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 MBLAC2Q68D91 279 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 PLA2G4FQ68DD2 849 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 TATDN1Q6P1N9 297 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 ANKRD13BQ86YJ7 626 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 RHOT1Q8IXI2 618 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 PPIL6Q8IXY8 311 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 ADGRF2Q8IZF7 708 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 DSELQ8IZU8 1212 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 SIX6OS1Q8N1H7 587 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 GABPB2Q8TAK5 448 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 NACC1Q96RE7 527 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 RIOX1Q9H6W3 641 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 KIAA1257Q9ULG3 409 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 HMX2A2RU54 273 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CXorf49A8MYA2 514 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 AIM2O14862 343 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 SPAG6O75602 509 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 IL18RAPO95256 599 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 FYNP06241 537 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 ALOX5P09917 674 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 UNGP13051 313 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms