RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 OR6Y1Q8NGX8 325 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ITFG1Q8TB96 612 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ERP44Q9BS26 406 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 GTPBP1O00178 669 aaKnown RBP16.74■□□□□ 0.27
PTCH1-201ENST00000331920 EPN2O95208 641 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 CYP2F1P24903 491 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ACLYP53396 1101 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 PTPN5P54829 565 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ACOT1Q86TX2 421 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 TEKT5Q96M29 485 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 MID1IP1Q9NPA3 183 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ING4Q9UNL4 249 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 H7C4K7 107 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 CLOCKO15516 846 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 PDHBP11177 359 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 TYMPP19971 482 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 ALDH3A2P51648 485 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 GRM4Q14833 912 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 FNDC3BQ53EP0 1204 aaKnown RBP16.73■□□□□ 0.27
PTCH1-201ENST00000331920 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
PTCH1-201ENST00000331920 ALKBH4Q9NXW9 302 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 VANGL2Q9ULK5 521 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 NDUFAF1Q9Y375 327 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 MTA2O94776 668 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 SCTRP47872 440 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 QPRTQ15274 297 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 BPIFB6Q8NFQ5 453 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 PPP1R13LQ8WUF5 828 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 SLC16A3O15427 465 aaKnown RBP16.73■□□□□ 0.27
PTCH1-201ENST00000331920 COPS4Q9BT78 406 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 COLEC11Q9BWP8 271 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 PSMD9O00233 223 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 KMOO15229 486 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 TFDP3Q5H9I0 405 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.73■□□□□ 0.27
PTCH1-201ENST00000331920 ZFYVE28Q9HCC9 887 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 GJA1P17302 382 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 LRPAP1P30533 357 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 USP11P51784 963 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 MPP2Q14168 576 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 PSMA8Q8TAA3 256 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 HAVCR1Q96D42 359 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 BTBD7Q9P203 1132 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 SUCOQ9UBS9 1254 aaKnown RBP16.73■□□□□ 0.27
PTCH1-201ENST00000331920 VPS51Q9UID3 782 aa16.73■□□□□ 0.27
PTCH1-201ENST00000331920 RAB25P57735 213 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 AP1S1P61966 158 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 ERICH5Q6P6B1 374 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 DHFR2Q86XF0 187 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 ZDHHC13Q8IUH4 622 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 SLC22A9Q8IVM8 553 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 GPR108Q9NPR9 543 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.72■□□□□ 0.27
PTCH1-201ENST00000331920 BAATQ14032 418 aaPredicted RBP16.72■□□□□ 0.27
PTCH1-201ENST00000331920 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 PARGQ86W56 976 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 MAGEE2Q8TD90 523 aaPredicted RBP16.72■□□□□ 0.27
PTCH1-201ENST00000331920 NCKIPSDQ9NZQ3 722 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 RPS6KA6Q9UK32 745 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 AXIN2Q9Y2T1 843 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 H2AFXP16104 143 aaPredicted RBP16.72■□□□□ 0.27
PTCH1-201ENST00000331920 PLK1P53350 603 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 EPHB3P54753 998 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 AP5B1Q2VPB7 878 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 S100ZQ8WXG8 99 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 KIAA1257Q9ULG3 409 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 RAG1P15918 1043 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 RPL9P32969 192 aaKnown RBP16.72■□□□□ 0.27
PTCH1-201ENST00000331920 RPL10AP62906 217 aaKnown RBP16.72■□□□□ 0.27
PTCH1-201ENST00000331920 MADCAM1Q13477 382 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 R3HDM1Q15032 1099 aaKnown RBP16.72■□□□□ 0.27
PTCH1-201ENST00000331920 LPCAT1Q8NF37 534 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
PTCH1-201ENST00000331920 UGT2B28Q9BY64 529 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 REEP1Q9H902 201 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 ARAP3Q8WWN8 1544 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 WRBO00258 174 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 TMCC2O75069 709 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 MYL9P24844 172 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 CENPCQ03188 943 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 KCNA10Q16322 511 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 SLC12A8A0AV02 714 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 PDXKO00764 312 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 DGAT1O75907 488 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 LCA5LO95447 670 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 TCF4P15884 667 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 AKT2P31751 481 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 MAGEA2P43356 314 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 TAF6P49848 677 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 C4orf22Q6V702 233 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 LRRC70Q7Z2Q7 622 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 DEFB128Q7Z7B8 93 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 LRRC17Q8N6Y2 441 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 ANKFN1Q8N957 763 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 TMEM121Q9BTD3 319 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 NUDT5Q9UKK9 219 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 MYRFQ9Y2G1 1151 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
PTCH1-201ENST00000331920 E7ENQ6 273 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms