RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 TIGD2Q4W5G0 525 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 TWF2Q6IBS0 349 aaKnown RBP17.6■□□□□ 0.41
PRKCD-201ENST00000330452 LSMEM2Q8N112 164 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 TTC30BQ8N4P2 665 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 PCYOX1LQ8NBM8 494 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 PDZD8Q8NEN9 1154 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 CALML6Q8TD86 181 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 GIPC2Q8TF65 315 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 PPP1R13LQ8WUF5 828 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 XAB2Q9HCS7 855 aaKnown RBP17.6■□□□□ 0.41
PRKCD-201ENST00000330452 NPHS2Q9NP85 383 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 TJP2Q9UDY2 1190 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 hCG_1818297A0A087WSY0 165 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 MYOCOSA0A1B0GUC4 107 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 FAM189A1O60320 539 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 TMCC2O75069 709 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 KRT75O95678 551 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 CALB1P05937 261 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 ABCB1P08183 1280 aaPredicted RBP17.6■□□□□ 0.41
PRKCD-201ENST00000330452 THRAP10827 490 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 PMLP29590 882 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 DYNLT1P63172 113 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 ZNF829Q3KNS6 432 aaPredicted RBP17.6■□□□□ 0.41
PRKCD-201ENST00000330452 C6orf163Q5TEZ5 329 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 EGFLAMQ63HQ2 1017 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 TMEM130Q8N3G9 435 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 CDCA5Q96FF9 252 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 PRR11Q96HE9 360 aaPredicted RBP17.6■□□□□ 0.41
PRKCD-201ENST00000330452 CFAP57Q96MR6 1250 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 BTBD9Q96Q07 612 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 TMEM134Q9H6X4 195 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 VPS37BQ9H9H4 285 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 POU2F3Q9UKI9 436 aa17.6■□□□□ 0.41
PRKCD-201ENST00000330452 GLULP15104 373 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 ICAM3P32942 547 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 S100A5P33763 92 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 GAD2Q05329 585 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 TARBP2Q15633 366 aaKnown RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 PKN2Q16513 984 aaKnown RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 SMTNL2Q2TAL5 461 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 OTOAQ7RTW8 1153 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 MMAAQ8IVH4 418 aaKnown RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 TAB3Q8N5C8 712 aaPredicted RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 TMEM35BQ8NCS4 154 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 HCAR2Q8TDS4 363 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 ZNF696Q9H7X3 374 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 SACM1LQ9NTJ5 587 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 HACD3Q9P035 362 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 PCDHGA11Q9Y5H2 935 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 IGKV6D-21A0A0A0MT36 114 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 FAM47DPA6NHR8 397 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 SGK1O00141 431 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 FKBP6O75344 327 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 CIB2O75838 187 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 ITGBL1O95965 494 aaPredicted RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 ABHD2P08910 425 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 STAT5BP51692 787 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 C21orf59P57076 290 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 OSTNP61366 133 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 TFAMQ00059 246 aaKnown RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 OASLQ15646 514 aaKnown RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 CYP2A13Q16696 494 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 BOLA3Q53S33 107 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 MAP1SQ66K74 1059 aaPredicted RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 TRABD2AQ86V40 505 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 CDR2LQ86X02 465 aaPredicted RBP17.59■□□□□ 0.41
PRKCD-201ENST00000330452 C4orf33Q8N1A6 199 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 ELMOD1Q8N336 334 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 GALNT4Q8N4A0 578 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 GDPD5Q8WTR4 605 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 SGF29Q96ES7 293 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 SEZ6LQ9BYH1 1024 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 ADAMTS6Q9UKP5 1117 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 IFT52Q9Y366 437 aa17.59■□□□□ 0.41
PRKCD-201ENST00000330452 SOWAHBA6NEL2 793 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 FOXD2O60548 495 aaPredicted RBP17.58■□□□□ 0.41
PRKCD-201ENST00000330452 MSCO60682 206 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 PIAS1O75925 651 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 SBF1O95248 1867 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 KRT4P19013 534 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 ETV3P41162 512 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 CDKN2BP42772 138 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 MTM1Q13496 603 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 TFDP3Q5H9I0 405 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 KCNT1Q5JUK3 1230 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 WDR49Q8IV35 697 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 SLC25A41Q8N5S1 370 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 COPS5Q92905 334 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 NIF3L1Q9GZT8 377 aa17.58■□□□□ 0.41
PRKCD-201ENST00000330452 SULT1C4O75897 302 aa17.58■□□□□ 0.4
PRKCD-201ENST00000330452 CRYZL1O95825 349 aa17.58■□□□□ 0.4
PRKCD-201ENST00000330452 MYBPC1Q00872 1141 aa17.58■□□□□ 0.4
PRKCD-201ENST00000330452 SPCS2Q15005 226 aa17.58■□□□□ 0.4
PRKCD-201ENST00000330452 RNASEH2BQ5TBB1 312 aaKnown RBP17.58■□□□□ 0.4
PRKCD-201ENST00000330452 ITPRIPL1Q6GPH6 555 aa17.58■□□□□ 0.4
PRKCD-201ENST00000330452 DRICH1Q6PGQ1 229 aaPredicted RBP17.58■□□□□ 0.4
PRKCD-201ENST00000330452 LRRC71Q8N4P6 559 aa17.58■□□□□ 0.4
PRKCD-201ENST00000330452 ZNF398Q8TD17 642 aa17.58■□□□□ 0.4
PRKCD-201ENST00000330452 CLPTM1LQ96KA5 538 aa17.58■□□□□ 0.4
PRKCD-201ENST00000330452 PPP1R16BQ96T49 567 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms