RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 ZNF229Q9UJW7 825 aa17.62■□□□□ 0.41
GABRB3-202ENST00000311550 BLOC1S6Q9UL45 172 aa17.62■□□□□ 0.41
GABRB3-202ENST00000311550 SAC3D1A6NKF1 404 aa17.62■□□□□ 0.41
GABRB3-202ENST00000311550 HACD1B0YJ81 288 aa17.62■□□□□ 0.41
GABRB3-202ENST00000311550 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
GABRB3-202ENST00000311550 PTPN20Q4JDL3 420 aa17.62■□□□□ 0.41
GABRB3-202ENST00000311550 MARC1Q5VT66 337 aa17.62■□□□□ 0.41
GABRB3-202ENST00000311550 PIWIL2Q8TC59 973 aaKnown RBP17.62■□□□□ 0.41
GABRB3-202ENST00000311550 RNPEPQ9H4A4 650 aa17.62■□□□□ 0.41
GABRB3-202ENST00000311550 SLC11A2P49281 568 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 TUBP50607 506 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 C9orf131Q5VYM1 1079 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 ZBTB49Q6ZSB9 765 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 CPNE8Q86YQ8 564 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 RIOX2Q8IUF8 465 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 ZSCAN18Q8TBC5 510 aaPredicted RBP17.61■□□□□ 0.41
GABRB3-202ENST00000311550 POPDC2Q9HBU9 364 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 CXCL11O14625 94 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 TSPAN3O60637 253 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 PIGNO95427 931 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 CTXN3Q4LDR2 81 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 OVOS1Q6IE37 1185 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 PDGFCQ9NRA1 345 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 PAPOLBQ9NRJ5 636 aaKnown RBP17.61■□□□□ 0.41
GABRB3-202ENST00000311550 CST3P01034 146 aaPredicted RBP17.61■□□□□ 0.41
GABRB3-202ENST00000311550 MMP8P22894 467 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 PPP3CCP48454 512 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 PTDSS1P48651 473 aaKnown RBP17.61■□□□□ 0.41
GABRB3-202ENST00000311550 FASTKD3Q14CZ7 662 aaKnown RBP17.61■□□□□ 0.41
GABRB3-202ENST00000311550 CYP2R1Q6VVX0 501 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 TMC7Q7Z402 723 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 ADCK1Q86TW2 530 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 SPOCK2Q92563 424 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 LGMNQ99538 433 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 ASMTLO95671 621 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 EPHX2P34913 555 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 RGS2P41220 211 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 PEX5P50542 639 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 DTNBP1Q96EV8 351 aa17.61■□□□□ 0.41
GABRB3-202ENST00000311550 C12orf65Q9H3J6 166 aaKnown RBP17.61■□□□□ 0.41
GABRB3-202ENST00000311550 TRIM16O95361 564 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 GOT1P17174 413 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 NPY2RP49146 381 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 SCNN1BP51168 640 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 RTP1P59025 263 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 CDH18Q13634 790 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 GTF2H3Q13889 308 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ARHGEF7Q14155 803 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 PARP6Q2NL67 630 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 PPP2R3CQ969Q6 453 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 CDCA5Q96FF9 252 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 CCDC167Q9P0B6 97 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 HEATR9A2RTY3 570 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 IRF6O14896 467 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 PLA2G6O60733 806 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 EDF1O60869 148 aaKnown RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 DDX39BQ13838 428 aaKnown RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ALYREFQ86V81 257 aaKnown RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 NT5DC4Q86YG4 428 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 EFCAB3Q8N7B9 438 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ANKRD27Q96NW4 1050 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 BRD8Q9H0E9 1235 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 TBC1D23Q9NUY8 699 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ZMYM2Q9UBW7 1377 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 MED1Q15648 1581 aaPredicted RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 A8MUI8 341 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ERBB2P04626 1255 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 UBAP2LQ14157 1087 aaKnown RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 DDX53Q86TM3 631 aaKnown RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 SNRNP27Q8WVK2 155 aaKnown RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 MARK4Q96L34 752 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 PGLYRP2Q96PD5 576 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ZNF184Q99676 751 aaPredicted RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 GPBP1L1Q9HC44 474 aaPredicted RBP17.6■□□□□ 0.41
GABRB3-202ENST00000311550 TRHDEQ9UKU6 1024 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 BDNFP23560 247 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 KRT72Q14CN4 511 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 RIPOR1Q6ZS17 1223 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ZNF410Q86VK4 478 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 CDHR5Q9HBB8 845 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 TBC1D13Q9NVG8 400 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ZNF212Q9UDV6 495 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 ADGRA3Q8IWK6 1321 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 USP1O94782 785 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 LTFP02788 710 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 OXCT1P55809 520 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 WSCD1Q658N2 575 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 CCDC81Q6ZN84 652 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 RBBP8Q99708 897 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 VTA1Q9NP79 307 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 SH3BP1Q9Y3L3 701 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 PCDHA11Q9Y5I1 949 aa17.6■□□□□ 0.41
GABRB3-202ENST00000311550 SERPIND1P05546 499 aa17.59■□□□□ 0.41
GABRB3-202ENST00000311550 SLC20A2Q08357 652 aa17.59■□□□□ 0.41
GABRB3-202ENST00000311550 PLEKHA7Q6IQ23 1121 aa17.59■□□□□ 0.41
GABRB3-202ENST00000311550 ABHD15Q6UXT9 468 aa17.59■□□□□ 0.41
GABRB3-202ENST00000311550 MIER2Q8N344 545 aa17.59■□□□□ 0.41
GABRB3-202ENST00000311550 SMARCD1Q96GM5 515 aa17.59■□□□□ 0.41
GABRB3-202ENST00000311550 PIDD1Q9HB75 910 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms