RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 POLR3GO15318 223 aaPredicted RBP18.69■□□□□ 0.58
VIM-201ENST00000224237 CHADO15335 359 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 FGF10O15520 208 aaPredicted RBP18.69■□□□□ 0.58
VIM-201ENST00000224237 TLR5O60602 858 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 APOEP02649 317 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 MYZAPP0CAP1 466 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 SRGAP2BP0DMP2 458 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 ALDH1A3P47895 512 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 MANEALQ5VSG8 457 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 CENPUQ71F23 418 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 TADA2BQ86TJ2 420 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 ZNF276Q8N554 614 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 LRRN4Q8WUT4 740 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 C1orf74Q96LT6 269 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 PWWP2AQ96N64 755 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 LGMNQ99538 433 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 BRD8Q9H0E9 1235 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 PRDM12Q9H4Q4 367 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 CATSPERBQ9H7T0 1116 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 VPS18Q9P253 973 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 MAFFQ9ULX9 164 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 NEU3Q9UQ49 428 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 YIPF1Q9Y548 306 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 STK10O94804 968 aaKnown RBP18.69■□□□□ 0.58
VIM-201ENST00000224237 TTC4O95801 387 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 MOCS2O96007 188 aaPredicted RBP18.69■□□□□ 0.58
VIM-201ENST00000224237 VAV1P15498 845 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 MX2P20592 715 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 AP1B1Q10567 949 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 HIF1AQ16665 826 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 SNX30Q5VWJ9 437 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 ANKRD22Q5VYY1 191 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 RWDD4Q6NW29 188 aaKnown RBP18.69■□□□□ 0.58
VIM-201ENST00000224237 NPWQ8N729 165 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 CCDC110Q8TBZ0 833 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 TBC1D31Q96DN5 1066 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 ZBP1Q9H171 429 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 RAB6BQ9NRW1 208 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 SLC12A6Q9UHW9 1150 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 HS3ST4Q9Y661 456 aa18.69■□□□□ 0.58
VIM-201ENST00000224237 TBX18O95935 607 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 ELF1P32519 619 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 KPNA1P52294 538 aaPredicted RBP18.68■□□□□ 0.58
VIM-201ENST00000224237 KCNJ11Q14654 390 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 VEPH1Q14D04 833 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 HERC6Q8IVU3 1022 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 TAB3Q8N5C8 712 aaPredicted RBP18.68■□□□□ 0.58
VIM-201ENST00000224237 ATP6V0D2Q8N8Y2 350 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 CCNYQ8ND76 341 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 MYRFLQ96LU7 910 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 XPO7Q9UIA9 1087 aaKnown RBP18.68■□□□□ 0.58
VIM-201ENST00000224237 SLC4A7Q9Y6M7 1214 aa18.68■□□□□ 0.58
VIM-201ENST00000224237 PRRG1O14668 218 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 TMEM63AO94886 807 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 ACSL3O95573 720 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 CTSAP10619 480 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 HMGA1P17096 107 aaKnown RBP18.67■□□□□ 0.58
VIM-201ENST00000224237 MAGEA4P43358 317 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 MLLT6P55198 1093 aaPredicted RBP18.67■□□□□ 0.58
VIM-201ENST00000224237 ARL4CP56559 192 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 RING1Q06587 406 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 MTA1Q13330 715 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 TTMPQ5BVD1 217 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 ACBD5Q5T8D3 534 aaPredicted RBP18.67■□□□□ 0.58
VIM-201ENST00000224237 PPP1R21Q6ZMI0 780 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 ARHGEF18Q6ZSZ5 1173 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 CROCCP2Q86T23 111 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 MIB1Q86YT6 1006 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 TCEAL8Q8IYN2 117 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 ARL8AQ96BM9 186 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 HDAC11Q96DB2 347 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 P2RY11Q96G91 374 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 TRMT2BQ96GJ1 504 aaKnown RBP18.67■□□□□ 0.58
VIM-201ENST00000224237 BTN2A3PQ96KV6 586 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 ZNF512Q96ME7 567 aaPredicted RBP18.67■□□□□ 0.58
VIM-201ENST00000224237 TTC25Q96NG3 672 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 RAD9AQ99638 391 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 CCSER2Q9H7U1 834 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 TMBIM4Q9HC24 238 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 SAYSD1Q9NPB0 183 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 NINJ2Q9NZG7 142 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 PLXNA4Q9HCM2 1894 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 A0A0A0MRY4 1105 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 GOLGA6CA6NDK9 693 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 E9PAM4 449 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 GOLGA8MH3BSY2 632 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 EIF3HO15372 352 aaKnown RBP eCLIP18.67■□□□□ 0.58
VIM-201ENST00000224237 TEX28O15482 410 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 LILRB3O75022 631 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 CSPG5O95196 566 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 IGLV3-27P01718 113 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 SHBGP04278 402 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 GOLGA6DP0CG33 693 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 MAGEA6P43360 314 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 PPIDQ08752 370 aaKnown RBP18.67■□□□□ 0.58
VIM-201ENST00000224237 GALNT2Q10471 571 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 TAF12Q16514 161 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 KYNUQ16719 465 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 LZTR1Q8N653 840 aa18.67■□□□□ 0.58
VIM-201ENST00000224237 PHOSPHO2Q8TCD6 241 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms