RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	IL17RE	Q8NFR9	667 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	SLC9A6	Q92581	669 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	R3HDM4	Q96D70	268 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	MPP4	Q96JB8	637 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	CDK19	Q9BWU1	502 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	TMEM8A	Q9HCN3	771 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	ADARB2	Q9NS39	739 aa	Known RBP	6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	SERTAD4	Q9NUC0	356 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	SAGE1	Q9NXZ1	904 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	RIMKLB	Q9ULI2	386 aa		6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	6.54	□□□□□ -1.36
NRXN1-223	ENST00000625891	ITSN1	Q15811	1721 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	ACE	P12821	1306 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	PIK3C2A	O00443	1686 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	OR2W5	A6NFC9	320 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	PODXL	O00592	558 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	MGST3	O14880	152 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	URI1	O94763	535 aa	Predicted RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	NXPH3	O95157	252 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	HSP90AA1	P07900	732 aa	Known RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	NR2F6	P10588	404 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	NTSR1	P30989	418 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	SLC5A2	P31639	672 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	HTR7	P34969	479 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	GATM	P50440	423 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	SIM1	P81133	766 aa	Predicted RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	PTK2B	Q14289	1009 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	RAB30	Q15771	203 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	COLEC12	Q5KU26	742 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	ZKSCAN2	Q63HK3	967 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	ARL6IP4	Q66PJ3	421 aa	Known RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	MRNIP	Q6NTE8	343 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	LVRN	Q6Q4G3	990 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	CYP26C1	Q6V0L0	522 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	CAND1	Q86VP6	1230 aa	Known RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	NAXE	Q8NCW5	288 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	PPHLN1	Q8NEY8	458 aa	Known RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	USP13	Q92995	863 aa	Predicted RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	ZSCAN31	Q96LW9	406 aa	Predicted RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	INO80B	Q9C086	356 aa	Predicted RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	PCDHAC1	Q9H158	963 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	SLC25A32	Q9H2D1	315 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	LRFN1	Q9P244	771 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	FBXO9	Q9UK97	447 aa	Predicted RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	GJD2	Q9UKL4	321 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	DRG1	Q9Y295	367 aa	Known RBP	6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	ARHGEF10	O15013	1369 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	COL15A1	P39059	1388 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	WNK3	Q9BYP7	1800 aa		6.53	□□□□□ -1.36
NRXN1-223	ENST00000625891	QRICH2	Q9H0J4	1663 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	LRRC37A3	O60309	1634 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	CCDC151	A5D8V7	595 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	LINC00473	A8K010	186 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	NPC1	O15118	1278 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	TJP3	O95049	919 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	PECAM1	P16284	738 aa	Predicted RBP	6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	SERPINF1	P36955	418 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	PLA2G5	P39877	138 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	DDX10	Q13206	875 aa	Known RBP	6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	SPARCL1	Q14515	664 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	MAPKAPK3	Q16644	382 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	CYP1B1	Q16678	543 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	TMTC4	Q5T4D3	741 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	FAXC	Q5TGI0	409 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	STRIP1	Q5VSL9	837 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	ABLIM2	Q6H8Q1	611 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	ZNF551	Q7Z340	670 aa	Predicted RBP	6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	GALNT15	Q8N3T1	639 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	NGDN	Q8NEJ9	315 aa	Known RBP	6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	PPM1M	Q96MI6	270 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	MAGEH1	Q9H213	219 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	OBP2B	Q9NPH6	170 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	ARHGEF3	Q9NR81	526 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	IGSF9	Q9P2J2	1179 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	PDP2	Q9P2J9	529 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	LRIT1	Q9P2V4	623 aa		6.52	□□□□□ -1.37
NRXN1-223	ENST00000625891	SSH2	Q76I76	1423 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891		A0A1B0GVC2	190 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	LGALS16	A8MUM7	142 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	NCAM2	O15394	837 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	EPB41L2	O43491	1005 aa	Known RBP	6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	CBFA2T3	O75081	653 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	ITPKB	P27987	946 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	RARRES1	P49788	294 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	KRTAP10-11	P60412	298 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	GALNT1	Q10472	559 aa	Predicted RBP	6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	TAF12	Q16514	161 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	SLC4A8	Q2Y0W8	1093 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	CLASRP	Q8N2M8	674 aa	Known RBP	6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	METTL25	Q8N6Q8	603 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	ATG16L2	Q8NAA4	619 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	CTHRC1	Q96CG8	243 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	WDYHV1	Q96HA8	205 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	HIST1H2AA	Q96QV6	131 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	WDR24	Q96S15	920 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	HAPLN3	Q96S86	360 aa		6.51	□□□□□ -1.37
NRXN1-223	ENST00000625891	SIN3A	Q96ST3	1273 aa		6.51	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms