RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ILDR1Q86SU0 546 aaPredicted RBP3.78□□□□□ -1.81
ATXN3-248ENST00000558190 EXD1Q8NHP7 514 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 UTP15Q8TED0 518 aaKnown RBP3.78□□□□□ -1.81
ATXN3-248ENST00000558190 HIST1H2AHQ96KK5 128 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 HIST1H2AJQ99878 128 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 H2AFJQ9BTM1 129 aa3.78□□□□□ -1.81
ATXN3-248ENST00000558190 UFL1O94874 794 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 HSF2Q03933 536 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF677Q86XU0 584 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ZBTB8OSQ8IWT0 167 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 WDR11Q9BZH6 1224 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TRAF6Q9Y4K3 522 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 PLK4O00444 970 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 VPS4BO75351 444 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 NT5C2P49902 561 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 RORCP51449 518 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 RAD51Q06609 339 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 NEPROQ6NW34 567 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CLYBLQ8N0X4 340 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 OR7A2PQ8NGA2 310 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TNFRSF25Q93038 417 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 HERC2P3Q9BVR0 1158 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TDRD1Q9BXT4 1180 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 WDR70Q9NW82 654 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ARHGEF33A8MVX0 844 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 SLITRK3O94933 977 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 EYA4O95677 639 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 PSMA4P25789 261 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TNK2Q07912 1038 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 DDR2Q16832 855 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 GLRA4Q5JXX5 417 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 METTL21CQ5VZV1 264 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 C10orf53Q8N6V4 93 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 SEC14L1Q92503 715 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 DHX38Q92620 1227 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 NPAS2Q99743 824 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 RDH8Q9NYR8 311 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 SLC17A7Q9P2U7 560 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CYTH4Q9UIA0 394 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ERGIC3Q9Y282 383 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 PEX16Q9Y5Y5 336 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 APOA4P06727 396 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CHRM5P08912 532 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 MYBP10242 640 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 DSTYKQ6XUX3 929 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TAMM41Q96BW9 452 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 IMPAD1Q9NX62 359 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ATP6AP2A0A1C7CYW4 349 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 PLD2O14939 933 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 KDM4BO94953 1096 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 VPS37AQ8NEZ2 397 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TMIGD2Q96BF3 282 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 OR7A10O76100 309 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 NOL4O94818 638 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 GMFBP60983 142 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TMC2Q8TDI7 906 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF570Q96NI8 536 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 MTMR9Q96QG7 549 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 UBE2OQ9C0C9 1292 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CHST7Q9NS84 486 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 RARBP10826 455 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 SFT2D3Q587I9 215 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TWF2Q6IBS0 349 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TMC7Q7Z402 723 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ZCCHC9Q8N567 271 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TMEM245Q9H330 911 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 WDR6Q9NNW5 1121 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 TSR3Q9UJK0 312 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 MSL3P1P0C860 447 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 RFX1P22670 979 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 HMGB2P26583 209 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 PTENP60484 403 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 KCTD2Q14681 263 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 FIGNQ5HY92 759 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF540Q8NDQ6 660 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 RIC8BQ9NVN3 520 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 A0A0A6YYK5 440 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 NR5A2O00482 541 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 KCNH1O95259 989 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 HNRNPH3P31942 346 aaKnown RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 EFR3AQ14156 821 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 UBE2UQ5VVX9 321 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 ATG9AQ7Z3C6 839 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 GLT1D1Q96MS3 346 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 HGH1Q9BTY7 390 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 YIPF2Q9BWQ6 316 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 GTF3C4Q9UKN8 822 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 NOD1Q9Y239 953 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 MTF2Q9Y483 593 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CRHR1P34998 444 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 PTGER2P43116 358 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 OR7G1Q8NGA0 311 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 CHIAQ9BZP6 476 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 RGS18Q9NS28 235 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 DFFAO00273 331 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 HUS1O60921 280 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 HOXB7P09629 217 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 S100A3P33764 101 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 MAMLD1Q13495 774 aa3.77□□□□□ -1.81
ATXN3-248ENST00000558190 USF2Q15853 346 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms