RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PABPC3Q9H361 631 aaKnown RBP20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 SEMA4AQ9H3S1 761 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 MED4Q9NPJ6 270 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 MRPL17Q9NRX2 175 aaKnown RBP20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 TMEM51Q9NW97 253 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 GREB1Q4ZG55 1949 aa20.2■□□□□ 0.82
RBFOX1-215ENST00000553186 MORF4L2Q15014 288 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 BZW1Q7L1Q6 419 aaKnown RBP20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 CDKL3Q8IVW4 592 aaPredicted RBP20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 FCRL2Q96LA5 508 aaPredicted RBP20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 SH3GL2Q99962 352 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 ZBED2Q9BTP6 218 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 CYP4F11Q9HBI6 524 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 XPO7Q9UIA9 1087 aaKnown RBP20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 MAGED2Q9UNF1 606 aaPredicted RBP20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 PLAAQ9Y263 795 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 HMGA1P17096 107 aaKnown RBP20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 EFEMP1Q12805 493 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 FAM182AQ5T1J6 154 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 ZCCHC9Q8N567 271 aaKnown RBP20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 NETO2Q8NC67 525 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 HERVK_113Q902F9 699 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 CPT1BQ92523 772 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 TSPYL1Q9H0U9 437 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 ZBP1Q9H171 429 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 FNIP2Q9P278 1114 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 SHOC2Q9UQ13 582 aa20.19■□□□□ 0.82
RBFOX1-215ENST00000553186 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 TEX28O15482 410 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 SYN1P17600 705 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 EPHB2P29323 1055 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 OAS2P29728 719 aaKnown RBP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 UBAP2Q5T6F2 1119 aaKnown RBP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 MANEALQ5VSG8 457 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 CCDC25Q86WR0 208 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 HERC6Q8IVU3 1022 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 TP53INP2Q8IXH6 220 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 NPWQ8N729 165 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 SP7Q8TDD2 431 aaPredicted RBP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 PRCCQ92733 491 aaPredicted RBP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 SIK2Q9H0K1 926 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 OLA1Q9NTK5 396 aaKnown RBP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 STK39Q9UEW8 545 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 YIPF1Q9Y548 306 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 ZNF638Q14966 1978 aaKnown RBP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 HACD1B0YJ81 288 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 PCGF5Q86SE9 256 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 NAT8LQ8N9F0 302 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 KLHL23Q8NBE8 558 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 TFB1MQ8WVM0 346 aaKnown RBP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 LGMNQ99538 433 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 RAD9AQ99638 391 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 CCSER2Q9H7U1 834 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 RXFP1Q9HBX9 757 aa20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.18■□□□□ 0.82
RBFOX1-215ENST00000553186 CTSAP10619 480 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 HOXC13P31276 330 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 TBX4P57082 545 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 C10orf120Q5SQS8 335 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 SNX30Q5VWJ9 437 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 ANKRD22Q5VYY1 191 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 LRIG3Q6UXM1 1119 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 MYRFLQ96LU7 910 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 FOXP3Q9BZS1 431 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 DNAJC17Q9NVM6 304 aaKnown RBP20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 MARCH2Q9P0N8 246 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 SLC4A7Q9Y6M7 1214 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 KIAA1671Q9BY89 1806 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 NDC80O14777 642 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 TLR5O60602 858 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 SLC2A3P11169 496 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 VAV1P15498 845 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 PRKD1Q15139 912 aaPredicted RBP20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 HSP90B2PQ58FF3 399 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 RELL1Q8IUW5 271 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 PPIL6Q8IXY8 311 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 TCEAL8Q8IYN2 117 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 ZNF276Q8N554 614 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 OR2W6PQ8NHA6 318 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 PRDM12Q9H4Q4 367 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 PAK5Q9P286 719 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 HS3ST4Q9Y661 456 aa20.17■□□□□ 0.82
RBFOX1-215ENST00000553186 LCHNA4D1U4 455 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 GCATO75600 419 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 MOCS2O96007 188 aaPredicted RBP20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 IGLV3-27P01718 113 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 CSH1P0DML2 217 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 CSH2P0DML3 217 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 SRGAP2BP0DMP2 458 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 ALDH1A3P47895 512 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 MLLT6P55198 1093 aaPredicted RBP20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 CBX1P83916 185 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 NRG1Q02297 640 aaPredicted RBP20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 PDK1Q15118 436 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 TRIP4Q15650 581 aaPredicted RBP20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 MIB1Q86YT6 1006 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 TAB3Q8N5C8 712 aaPredicted RBP20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 PHOSPHO2Q8TCD6 241 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 OVCA2Q8WZ82 227 aa20.16■□□□□ 0.82
RBFOX1-215ENST00000553186 C1orf74Q96LT6 269 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms