RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ACVR2BQ13705 512 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 ATG16L1Q676U5 607 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 RNF139Q8WU17 664 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 SLC35F5Q8WV83 523 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 EBNA1BP2Q99848 306 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 FNDC3AQ9Y2H6 1198 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 FER1L6Q2WGJ9 1857 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 ATP5HO75947 161 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 SORBS2O94875 1100 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 SNAI1O95863 264 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 BCAT1P54687 386 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 ACSBG2Q5FVE4 666 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 CERCAMQ5T4B2 595 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 MFSD3Q96ES6 412 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 MARK4Q96L34 752 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 GAD1Q99259 594 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 FERMT1Q9BQL6 677 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 ULBP1Q9BZM6 244 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 PLLPQ9Y342 182 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 PPP2R3BQ9Y5P8 575 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 MT-CO1P00395 513 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 C6orf222P0C671 652 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 ZCCHC18P0CG32 403 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 SMIM10L2AP0DMW4 78 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 SMIM10L2BP0DMW5 78 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 SEPT6Q14141 434 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 C10orf107Q8IVU9 208 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 OXCT2Q9BYC2 517 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 C2CD2Q9Y426 696 aa14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 NDC80O14777 642 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 GSC2O15499 205 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 CIB2O75838 187 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 AP1G2O75843 785 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 POMCP01189 267 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 JCHAINP01591 159 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 MMP3P08254 477 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 TPBGLP0DKB5 382 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 SERPINB6P35237 376 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 CCR10P46092 362 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 TPI1P60174 286 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 TSNAXIP1Q2TAA8 658 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 TCHHL1Q5QJ38 904 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 SNX30Q5VWJ9 437 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 CES4AQ5XG92 561 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 RBM15BQ8NDT2 890 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 SLC26A7Q8TE54 656 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 XAB2Q9HCS7 855 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 SLC39A10Q9ULF5 831 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 MTO1Q9Y2Z2 717 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 SPECC1L-ADORA2AF8WAN1 911 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 PHGDHO43175 533 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 RFPL1O75677 317 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 DLDP09622 509 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 TAF6P49848 677 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 ITKQ08881 620 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 PCSK7Q16549 785 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 CCL14Q16627 93 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 MARCH8Q5T0T0 291 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 GPR142Q7Z601 462 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 CCNYL1Q8N7R7 359 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 PPTC7Q8NI37 304 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 PYDC1Q8WXC3 89 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 DNAJC9Q8WXX5 260 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 ARHGEF4Q9NR80 690 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 EFR3BQ9Y2G0 817 aa14.06□□□□□ -0.16
PRPF40B-209ENST00000548825 E7ESA3 106 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 SLC4A1P02730 911 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 ALADP13716 330 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 TCN1P20061 433 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 TGM2P21980 687 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 PRKD1Q15139 912 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 C6orf163Q5TEZ5 329 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 NCBP2-AS2Q69YL0 99 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 STRA8Q7Z7C7 330 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 WDR75Q8IWA0 830 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 MZB1Q8WU39 189 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 SIGLEC10Q96LC7 697 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 DDX43Q9NXZ2 648 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 DLGAP2Q9P1A6 1054 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 DNAJC25-GNG10A0A024R161 153 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 SDR42E2A6NKP2 422 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 NRP1O14786 923 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 HSPA4LO95757 839 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 ENPEPQ07075 957 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 RIPK1Q13546 671 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 RALGPS1Q5JS13 557 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 RGS9BPQ6ZS82 235 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 OSTM1Q86WC4 334 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 B3GALNT2Q8NCR0 500 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 ARRDC4Q8NCT1 418 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 PPFIBP2Q8ND30 876 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 KCNK13Q9HB14 408 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 C20orf96Q9NUD7 363 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 PIGVQ9NUD9 493 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 YJEFN3A6XGL0 299 aa14.05□□□□□ -0.16
PRPF40B-209ENST00000548825 E7ENQ6 273 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms