RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 SLC45A4Q5BKX6 768 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 SH2D4BQ5SQS7 431 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 CST9Q5W186 159 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 PMF1Q6P1K2 205 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 C16orf46Q6P387 395 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 NME8Q8N427 588 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 TMEM40Q8WWA1 233 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 CPT1BQ92523 772 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 E2F7Q96AV8 911 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 SRPK1Q96SB4 655 aaKnown RBP10.02□□□□□ -0.8
DDX11-229ENST00000545668 FOXP3Q9BZS1 431 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 VPS11Q9H270 941 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.8
DDX11-229ENST00000545668 PRKAG3Q9UGI9 489 aa10.02□□□□□ -0.8
DDX11-229ENST00000545668 MBLAC1A4D2B0 266 aaPredicted RBP10.02□□□□□ -0.81
DDX11-229ENST00000545668 C3orf70A6NLC5 250 aaPredicted RBP10.02□□□□□ -0.81
DDX11-229ENST00000545668 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
DDX11-229ENST00000545668 OAS1P00973 400 aaKnown RBP10.02□□□□□ -0.81
DDX11-229ENST00000545668 ZNF865P0CJ78 1059 aaPredicted RBP10.02□□□□□ -0.81
DDX11-229ENST00000545668 SNX16P57768 344 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 GPX6P59796 221 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 CRADDP78560 199 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 PCBP1Q15365 356 aaKnown RBP eCLIP10.02□□□□□ -0.81
DDX11-229ENST00000545668 FBXO47Q5MNV8 452 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 RNASEH2BQ5TBB1 312 aaKnown RBP10.02□□□□□ -0.81
DDX11-229ENST00000545668 C9orf57Q5W0N0 161 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 BBS12Q6ZW61 710 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 TTC16Q8NEE8 873 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 FAM149B1Q96BN6 582 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 SMYD2Q9NRG4 433 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 NDE1Q9NXR1 346 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 EFR3BQ9Y2G0 817 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 ACTL7BQ9Y614 415 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 WASF2Q9Y6W5 498 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 MGAMO43451 1857 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 USP1O94782 785 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 ADORA2BP29275 332 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 SDC4P31431 198 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 LRRC52Q8N7C0 313 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 C10orf82Q8WW14 230 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 RSAD1Q9HA92 442 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 MTO1Q9Y2Z2 717 aaKnown RBP10.02□□□□□ -0.81
DDX11-229ENST00000545668 NR2E3Q9Y5X4 410 aa10.02□□□□□ -0.81
DDX11-229ENST00000545668 SMIM28A0A1B0GU29 152 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 TCRBV9S1A1TA0A576 114 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 C17orf102A2RUQ5 167 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 C2CD4BA6NLJ0 364 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 TNPO2O14787 897 aaKnown RBP10.01□□□□□ -0.81
DDX11-229ENST00000545668 XPOTO43592 962 aaKnown RBP10.01□□□□□ -0.81
DDX11-229ENST00000545668 TMEM63AO94886 807 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 CD4P01730 458 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 ABL2P42684 1182 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 HIC1Q14526 733 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 RABGAP1LQ5R372 815 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 ATG16L1Q676U5 607 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 NXNQ6DKJ4 435 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 TWF2Q6IBS0 349 aaKnown RBP10.01□□□□□ -0.81
DDX11-229ENST00000545668 IZUMO2Q6UXV1 221 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 LRRC74BQ6ZQY2 392 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 TTC30AQ86WT1 665 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 SLC35B2Q8TB61 432 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 USP6NLQ92738 828 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 INPP5DQ92835 1189 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 RNF39Q9H2S5 420 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 SNX25Q9H3E2 840 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 DHX35Q9H5Z1 703 aaKnown RBP10.01□□□□□ -0.81
DDX11-229ENST00000545668 MRGBPQ9NV56 204 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 RABGEF1Q9UJ41 708 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 ZNF180Q9UJW8 692 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 KPNA7A9QM74 516 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 GSC2O15499 205 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 PDE5AO76074 875 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 AXLP30530 894 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 GNL1P36915 607 aaPredicted RBP10.01□□□□□ -0.81
DDX11-229ENST00000545668 RGS2P41220 211 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 GALK1P51570 392 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 SOWAHAQ2M3V2 549 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 ACSBG2Q5FVE4 666 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 ANO7Q6IWH7 933 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 C4orf50Q6ZRC1 276 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 RINLQ6ZS11 566 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 RASSF3Q86WH2 238 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 CMASQ8NFW8 434 aaPredicted RBP10.01□□□□□ -0.81
DDX11-229ENST00000545668 PPP4R1Q8TF05 950 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 WDR60Q8WVS4 1066 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 SLC7A6OSQ96CW6 309 aaPredicted RBP10.01□□□□□ -0.81
DDX11-229ENST00000545668 OXNAD1Q96HP4 312 aaPredicted RBP10.01□□□□□ -0.81
DDX11-229ENST00000545668 SERAC1Q96JX3 654 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 B3GNT5Q9BYG0 378 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 KLC2Q9H0B6 622 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 DPEP3Q9H4B8 488 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 CNTN3Q9P232 1028 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 CITO14578 2027 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 APOC4-APOC2K7ER74 178 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 C2CD2LO14523 706 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 HCRTO43612 131 aa10.01□□□□□ -0.81
DDX11-229ENST00000545668 KRT38O76015 456 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms