RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 PLEKHA7Q6IQ23 1121 aa17.54■□□□□ 0.4
NELFA-216ENST00000542778 TAPT1Q6NXT6 567 aa17.54■□□□□ 0.4
NELFA-216ENST00000542778 ZNF677Q86XU0 584 aa17.54■□□□□ 0.4
NELFA-216ENST00000542778 DQX1Q8TE96 717 aaKnown RBP17.54■□□□□ 0.4
NELFA-216ENST00000542778 SHCBP1LQ9BZQ2 653 aa17.54■□□□□ 0.4
NELFA-216ENST00000542778 LIN28AQ9H9Z2 209 aaKnown RBP17.54■□□□□ 0.4
NELFA-216ENST00000542778 IVNS1ABPQ9Y6Y0 642 aa17.54■□□□□ 0.4
NELFA-216ENST00000542778 TMEM247A6NEH6 219 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 RPL22P35268 128 aaKnown RBP17.53■□□□□ 0.4
NELFA-216ENST00000542778 ELK3P41970 407 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 CDK9P50750 372 aaKnown RBP17.53■□□□□ 0.4
NELFA-216ENST00000542778 NAA20P61599 178 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 PFKPQ01813 784 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 PDCD4Q53EL6 469 aaKnown RBP17.53■□□□□ 0.4
NELFA-216ENST00000542778 RAB3IL1Q8TBN0 382 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 PI4K2AQ9BTU6 479 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 APOL6Q9BWW8 343 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 PTPRJQ12913 1337 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 KBTBD13C9JR72 458 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 ADCY6O43306 1168 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 SIN3BO75182 1162 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 CFHP08603 1231 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 PDGFRBP09619 1106 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 PTPN7P35236 360 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 ACADVLP49748 655 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 IGBP1P78318 339 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 RARS2Q5T160 578 aaKnown RBP17.53■□□□□ 0.4
NELFA-216ENST00000542778 CDR2LQ86X02 465 aaPredicted RBP17.53■□□□□ 0.4
NELFA-216ENST00000542778 TICAM1Q8IUC6 712 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 C2orf69Q8N8R5 385 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 GIPC3Q8TF64 312 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 ACSF2Q96CM8 615 aaPredicted RBP17.53■□□□□ 0.4
NELFA-216ENST00000542778 XAB2Q9HCS7 855 aaKnown RBP17.53■□□□□ 0.4
NELFA-216ENST00000542778 CPA4Q9UI42 421 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 EXOC7Q9UPT5 735 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 PCDHB2Q9Y5E7 798 aa17.53■□□□□ 0.4
NELFA-216ENST00000542778 A0A1B0GTW7 788 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 FBXO21O94952 628 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 WEE2P0C1S8 567 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 COL6A2P12110 1019 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 ENTPD1P49961 510 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 PSMD7P51665 324 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 CCR3P51677 355 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 RELAQ04206 551 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 TFDP3Q5H9I0 405 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 C6orf52Q5T4I8 152 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 ZCCHC23Q6ZST2 131 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 GPR142Q7Z601 462 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 SLC26A11Q86WA9 606 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 DEPTORQ8TB45 409 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 ZNF516Q92618 1163 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 ZNF778Q96MU6 729 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 SLC13A1Q9BZW2 595 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 RRN3Q9NYV6 651 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 GNEQ9Y223 722 aaKnown RBP17.52■□□□□ 0.4
NELFA-216ENST00000542778 SCINQ9Y6U3 715 aa17.52■□□□□ 0.4
NELFA-216ENST00000542778 SNAI1O95863 264 aaPredicted RBP17.52■□□□□ 0.39
NELFA-216ENST00000542778 BPGMP07738 259 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 ZNF286BP0CG31 522 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 THRAP10827 490 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 LIG4P49917 911 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 GCNT1Q02742 428 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 STX3Q13277 289 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 FAM160B1Q5W0V3 765 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 FEZF2Q8TBJ5 459 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 VPS50Q96JG6 964 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 OSBPL6Q9BZF3 934 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 NRDE2Q9H7Z3 1164 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 NRBP2Q9NSY0 501 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 THAP1Q9NVV9 213 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 SAE1Q9UBE0 346 aaPredicted RBP17.52■□□□□ 0.39
NELFA-216ENST00000542778 IP6K2Q9UHH9 426 aa17.52■□□□□ 0.39
NELFA-216ENST00000542778 K7ERI5 159 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 MAFO75444 373 aaPredicted RBP17.51■□□□□ 0.39
NELFA-216ENST00000542778 CDKN2BP42772 138 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 YWHAGP61981 247 aaKnown RBP eCLIP17.51■□□□□ 0.39
NELFA-216ENST00000542778 CDKL1Q00532 357 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 ARHGAP1Q07960 439 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 CYP24A1Q07973 514 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 PEX6Q13608 980 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 SPIDRQ14159 915 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 C16orf72Q14CZ0 275 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 TXNRD3NBQ6F5E7 133 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 ELMSAN1Q6PJG2 1045 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 TMEM130Q8N3G9 435 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 SHCBP1Q8NEM2 672 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 TFB1MQ8WVM0 346 aaKnown RBP17.51■□□□□ 0.39
NELFA-216ENST00000542778 FBXL18Q96ME1 805 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 APOBEC2Q9Y235 224 aaKnown RBP17.51■□□□□ 0.39
NELFA-216ENST00000542778 NR2E3Q9Y5X4 410 aa17.51■□□□□ 0.39
NELFA-216ENST00000542778 HTR3EA5X5Y0 456 aa17.5■□□□□ 0.39
NELFA-216ENST00000542778 RFPL1O75677 317 aa17.5■□□□□ 0.39
NELFA-216ENST00000542778 TRPA1O75762 1119 aa17.5■□□□□ 0.39
NELFA-216ENST00000542778 SNRPAP09012 282 aaKnown RBP17.5■□□□□ 0.39
NELFA-216ENST00000542778 ZNF23P17027 643 aa17.5■□□□□ 0.39
NELFA-216ENST00000542778 HALP42357 657 aa17.5■□□□□ 0.39
NELFA-216ENST00000542778 CLCN3P51790 818 aa17.5■□□□□ 0.39
NELFA-216ENST00000542778 HUNKP57058 714 aa17.5■□□□□ 0.39
NELFA-216ENST00000542778 RPL7AP62424 266 aaKnown RBP17.5■□□□□ 0.39
NELFA-216ENST00000542778 NOMO3P69849 1222 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms