RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CYLDQ9NQC7 956 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 UBQLN1Q9UMX0 589 aaKnown RBP15.24■□□□□ 0.03
DDX55-209ENST00000542286 PTGESO14684 152 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 MDM4O15151 490 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 CELF2O95319 508 aaKnown RBP15.24■□□□□ 0.03
DDX55-209ENST00000542286 BCAT1P54687 386 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 POLE2P56282 527 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 DPYSL2Q16555 572 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 SLC26A9Q7LBE3 791 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 VPS52Q8N1B4 723 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 B3GALNT2Q8NCR0 500 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 TTC8Q8TAM2 541 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 WNT8BQ93098 351 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 EPAS1Q99814 870 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 ZNF670Q9BS34 389 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 TSSK1BQ9BXA7 367 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 HEY2Q9UBP5 337 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 GNEQ9Y223 722 aaKnown RBP15.24■□□□□ 0.03
DDX55-209ENST00000542286 IQANK1A0A1B0GTG1 560 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 A0A1B0GVG6 124 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 BCLAF3A2AJT9 711 aaKnown RBP15.23■□□□□ 0.03
DDX55-209ENST00000542286 M0QYT0 321 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 COPEO14579 308 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 ATP5HO75947 161 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 SERPINB3P29508 390 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 CPA2P48052 419 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 NEK3P51956 506 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 SLC45A4Q5BKX6 768 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 HEATR6Q6AI08 1181 aaKnown RBP15.23■□□□□ 0.03
DDX55-209ENST00000542286 SLC26A11Q86WA9 606 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 ENDOVQ8N8Q3 282 aaKnown RBP15.23■□□□□ 0.03
DDX55-209ENST00000542286 HASPINQ8TF76 798 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 EZH1Q92800 747 aaPredicted RBP15.23■□□□□ 0.03
DDX55-209ENST00000542286 SLC7A6OSQ96CW6 309 aaPredicted RBP15.23■□□□□ 0.03
DDX55-209ENST00000542286 APOPT1Q96IL0 206 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 MED10Q9BTT4 135 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 TRIM4Q9C037 500 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 C20orf27Q9GZN8 174 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 PLEKHA5Q9HAU0 1116 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 ARHGEF4Q9NR80 690 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 PIGVQ9NUD9 493 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDX55-209ENST00000542286 MORF4L1Q9UBU8 362 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 PSAT1Q9Y617 370 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 NRCAMQ92823 1304 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 ENTPD5O75356 428 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 RFPL1O75677 317 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 MLH1P40692 756 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 SERPINB4P48594 390 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 KYAT1Q16773 422 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 MUM1Q2TAK8 710 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 APBB1IPQ7Z5R6 666 aaPredicted RBP15.23■□□□□ 0.03
DDX55-209ENST00000542286 ALYREFQ86V81 257 aaKnown RBP15.23■□□□□ 0.03
DDX55-209ENST00000542286 HACE1Q8IYU2 909 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 LRRC52Q8N7C0 313 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 UCMAQ8WVF2 138 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 EDEM1Q92611 657 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 TBC1D10AQ9BXI6 508 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 VCXQ9H320 206 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 ZFP69BQ9UJL9 534 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 TTC3P53804 2025 aa15.23■□□□□ 0.03
DDX55-209ENST00000542286 HUS1O60921 280 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 PSMB4P28070 264 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 PSEN2P49810 448 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 TAF6P49848 677 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 ARHGAP17Q68EM7 881 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 IQSEC1Q6DN90 963 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 C3orf58Q8NDZ4 430 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 USP6NLQ92738 828 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 GRAMD1AQ96CP6 724 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 APOL2Q9BQE5 337 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 KCNK13Q9HB14 408 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 ARL8BQ9NVJ2 186 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 MIOSQ9NXC5 875 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.22■□□□□ 0.03
DDX55-209ENST00000542286 APOEP02649 317 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 HOXD8P13378 290 aaPredicted RBP15.22■□□□□ 0.03
DDX55-209ENST00000542286 MGAT1P26572 445 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 NUMBP49757 651 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 STILQ15468 1287 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 OR52E8Q6IFG1 317 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 RGS9BPQ6ZS82 235 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 NT5DC4Q86YG4 428 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 HTR3CQ8WXA8 447 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 GAD1Q99259 594 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 GORASP1Q9BQQ3 440 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 TMEM120AQ9BXJ8 343 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 ACSS2Q9NR19 701 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 USP3Q9Y6I4 520 aa15.22■□□□□ 0.03
DDX55-209ENST00000542286 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 CASTOR2A6NHX0 329 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 YJEFN3A6XGL0 299 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 RFWD3Q6PCD5 774 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 RFX8Q6ZV50 586 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 NDUFAF2Q8N183 169 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 CRYBG2Q8N1P7 616 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 COLGALT1Q8NBJ5 622 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 PHC3Q8NDX5 983 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 STKLD1Q8NE28 680 aa15.21■□□□□ 0.03
DDX55-209ENST00000542286 B4GALNT2Q8NHY0 566 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms