RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PPP1R14BQ96C90 147 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 WDR83Q9BRX9 315 aaKnown RBP11.94□□□□□ -0.5
USP35-207ENST00000530546 ZFYVE28Q9HCC9 887 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 GDAP2Q9NXN4 497 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 ST3GAL5Q9UNP4 418 aa11.94□□□□□ -0.5
USP35-207ENST00000530546 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 TMCC1O94876 653 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 NDUFV1P49821 464 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 SESN3P58005 492 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 GBE1Q04446 702 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 MDH1BQ5I0G3 518 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 DEFB106AQ8N104 65 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 CCDC110Q8TBZ0 833 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 TNIP3Q96KP6 325 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 TRABDQ9H4I3 376 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 UBN1Q9NPG3 1134 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 TMPRSS4Q9NRS4 437 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 STX18Q9P2W9 335 aaKnown RBP11.93□□□□□ -0.5
USP35-207ENST00000530546 AP4E1Q9UPM8 1137 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 MFHAS1Q9Y4C4 1052 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 A0A1W2PPM1 405 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 FAM200BP0CF97 657 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 STIP1P31948 543 aaKnown RBP11.93□□□□□ -0.5
USP35-207ENST00000530546 PITX1P78337 314 aaPredicted RBP11.93□□□□□ -0.5
USP35-207ENST00000530546 MRPS6P82932 125 aaKnown RBP11.93□□□□□ -0.5
USP35-207ENST00000530546 LIN52Q52LA3 116 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 DCAF6Q58WW2 860 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 GDF6Q6KF10 455 aaPredicted RBP11.93□□□□□ -0.5
USP35-207ENST00000530546 IGDCC3Q8IVU1 814 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 NRG4Q8WWG1 115 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 SOCS4Q8WXH5 440 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 ZIC5Q96T25 663 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 EURLQ9NYK6 297 aa11.93□□□□□ -0.5
USP35-207ENST00000530546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP35-207ENST00000530546 NDC80O14777 642 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 LYNP07948 512 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 PTPN1P18031 435 aaKnown RBP11.92□□□□□ -0.5
USP35-207ENST00000530546 AMPD1P23109 780 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 ELK3P41970 407 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 SULT1E1P49888 294 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 YWHAGP61981 247 aaKnown RBP eCLIP11.92□□□□□ -0.5
USP35-207ENST00000530546 TRIM32Q13049 653 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 MAP7Q14244 749 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
USP35-207ENST00000530546 XKR4Q5GH76 650 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 SLC26A9Q7LBE3 791 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 SAPCD2Q86UD0 394 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 TRABD2AQ86V40 505 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 ZDHHC17Q8IUH5 632 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 TRIM42Q8IWZ5 723 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 NME8Q8N427 588 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 KLF6Q99612 283 aaPredicted RBP11.92□□□□□ -0.5
USP35-207ENST00000530546 TUBB6Q9BUF5 446 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 NRDE2Q9H7Z3 1164 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 USP29Q9HBJ7 922 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 MIOSQ9NXC5 875 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 GABRQQ9UN88 632 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 CASTOR2A6NHX0 329 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 L1CAMP32004 1257 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 PHBP35232 272 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 CDK7P50613 346 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 MAP3K7CLP57077 242 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 SLC45A4Q5BKX6 768 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 ZNF449Q6P9G9 518 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 HIC2Q96JB3 615 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 KCTD15Q96SI1 283 aaPredicted RBP11.92□□□□□ -0.5
USP35-207ENST00000530546 MTG1Q9BT17 334 aaPredicted RBP11.92□□□□□ -0.5
USP35-207ENST00000530546 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
USP35-207ENST00000530546 LRRC4Q9HBW1 653 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 PHTF1Q9UMS5 762 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 TBC1D30Q9Y2I9 924 aa11.92□□□□□ -0.5
USP35-207ENST00000530546 I3L4J1 428 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 GOLGA8RI6L899 631 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 CAPN9O14815 690 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 CCDC22O60826 627 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 ZWINTO95229 277 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 PSMG1O95456 288 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 APRTP07741 180 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 FOXN2P32314 431 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 NME3Q13232 169 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 KIAA0319Q5VV43 1072 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 TAF2Q6P1X5 1199 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 FAM47EQ6ZV65 393 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 CTU1Q7Z7A3 348 aaKnown RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 RIBC1Q8N443 379 aaPredicted RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 STMN2Q93045 179 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 CFAP36Q96G28 342 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 SENP8Q96LD8 212 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 FAM105AQ9NUU6 356 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 ETNK2Q9NVF9 386 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 TRPV2Q9Y5S1 764 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 FAM47DPA6NHR8 397 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 MDM4O15151 490 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 DUSP11O75319 330 aaKnown RBP11.91□□□□□ -0.5
USP35-207ENST00000530546 ATP6V1G1O75348 118 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 GOT1P17174 413 aa11.91□□□□□ -0.5
USP35-207ENST00000530546 TGM2P21980 687 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms