RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GXYLT2A0PJZ3 443 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 AQP12BA6NM10 295 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 ZNF814B7Z6K7 855 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 KCNAB3O43448 404 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 PRC1O43663 620 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 PLA2G6O60733 806 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 CAND2O75155 1236 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 TOMM40O96008 361 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 KRT18P05783 430 aaKnown RBP3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 TFEBP19484 476 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 AK2P54819 239 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 SLC12A2P55011 1212 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 FOXG1P55316 489 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 SLC37A1P57057 533 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 B4GALNT1Q00973 533 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 MAPK7Q13164 816 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 HLTFQ14527 1009 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 MIDNQ504T8 468 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 HSP90AB2PQ58FF8 381 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 NUGGCQ68CJ6 796 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 XRRA1Q6P2D8 792 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 ZNF474Q6S9Z5 364 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 SKAP1Q86WV1 359 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 UEVLDQ8IX04 471 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 MMP21Q8N119 569 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 SGCZQ96LD1 299 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 PIMREGQ9BSJ6 248 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 STK33Q9BYT3 514 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 EBF3Q9H4W6 596 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 SEMA4BQ9NPR2 832 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 NECTIN3Q9NQS3 549 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 CHST12Q9NRB3 414 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 POT1Q9NUX5 634 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 CDC23Q9UJX2 597 aa3.9□□□□□ -1.79
HMGB1P29-201ENST00000505659 MYMKA6NI61 221 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 F8W810 466 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 PPP6R2O75170 966 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 RPP40O75818 363 aaKnown RBP3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 NDUFB8O95169 186 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 CRYABP02511 175 aaKnown RBP3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 WNT1P04628 370 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 MYL1P05976 194 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 ENO1P06733 434 aaKnown RBP3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 ANXA6P08133 673 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 AKR1A1P14550 325 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 SCP2P22307 547 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 FAM3BP58499 235 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 PICALMQ13492 652 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 CSHL1Q14406 222 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 ANXA2RQ3ZCQ2 193 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 LIPMQ5VYY2 423 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 ANKRD40Q6AI12 368 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 BHLHA9Q7RTU4 235 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 ZFPM2Q8WW38 1151 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 MUL1Q969V5 352 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 CCDC136Q96JN2 1154 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 ZNF347Q96SE7 839 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 MYD88Q99836 296 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 ABHD14AQ9BUJ0 271 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 TRIM2Q9C040 744 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 KCNK9Q9NPC2 374 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 PAPOLBQ9NRJ5 636 aaKnown RBP3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 UTS2RQ9UKP6 389 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 UBE2J1Q9Y385 318 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 EMSYQ7Z589 1322 aa3.89□□□□□ -1.79
HMGB1P29-201ENST00000505659 LOC105369274A0A096LPK9 316 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 LOC102723532A0A0G2JNH3 316 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 IGLV5-39A0A0G2JS06 123 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 TMEM272A0A1B0GTI8 110 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 CD8B2A6NJW9 211 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 A6NNC1 897 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 B4DGG1 531 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 KIF28PB7ZC32 967 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 PROB1E7EW31 1015 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 ASNA1O43681 348 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 TLX3O43711 291 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 TULP3O75386 442 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 CNTN5O94779 1100 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 EPN2O95208 641 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 NTSR2O95665 410 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 AKT1P31749 480 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 TAS2R50P59544 299 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 SHC2P98077 582 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 CBFBQ13951 182 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 AAK1Q2M2I8 961 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 C11orf96Q7Z7L8 435 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 SAMD14Q8IZD0 417 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 ADGRF3Q8IZF5 1079 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 OR4N4Q8N0Y3 316 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 PELI3Q8N2H9 469 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 DEPTORQ8TB45 409 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 BCAS4Q8TDM0 211 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 NSMCE1Q8WV22 266 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 KAT2BQ92831 832 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 SLC25A28Q96A46 364 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 PAAF1Q9BRP4 392 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 FAM234AQ9H0X4 552 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 PRDM16Q9HAZ2 1276 aa3.88□□□□□ -1.79
HMGB1P29-201ENST00000505659 HELLSQ9NRZ9 838 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms