RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 NOCTQ9UK39 431 aaKnown RBP13.1□□□□□ -0.31
PPP1R3F-204ENST00000471261 HCN2Q9UL51 889 aa13.1□□□□□ -0.31
PPP1R3F-204ENST00000471261 SLC27A6Q9Y2P4 619 aa13.1□□□□□ -0.31
PPP1R3F-204ENST00000471261 STARD13Q9Y3M8 1113 aa13.1□□□□□ -0.31
PPP1R3F-204ENST00000471261 FAM186AA6NE01 2351 aa13.1□□□□□ -0.31
PPP1R3F-204ENST00000471261 DCLK1O15075 740 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 TEX33O43247 280 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 DAB1O75553 588 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 SERPINC1P01008 464 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 ABCB4P21439 1286 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 CDH5P33151 784 aaPredicted RBP13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 TPM4P67936 248 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 CDR2Q01850 454 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 USP39Q53GS9 565 aaKnown RBP13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 RAP1GAP2Q684P5 730 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 SLC26A9Q7LBE3 791 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 KBTBD6Q86V97 674 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 CHSY1Q86X52 802 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 ZNF677Q86XU0 584 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 MFN1Q8IWA4 741 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 CCDC117Q8IWD4 279 aaPredicted RBP13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 FANCMQ8IYD8 2048 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 CFAP52Q8N1V2 620 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 HJURPQ8NCD3 748 aaPredicted RBP13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 SORCS1Q8WY21 1168 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 AZIN2Q96A70 460 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 BTN2A3PQ96KV6 586 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 PRICKLE1Q96MT3 831 aaPredicted RBP13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 ABCB8Q9NUT2 735 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 SLC12A6Q9UHW9 1150 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
PPP1R3F-204ENST00000471261 GVINP1Q7Z2Y8 2422 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 WASH3PC4AMC7 463 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 M0QYT0 321 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 GFRA2O00451 464 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 IGLV3-25P01717 112 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 SLC2A3P11169 496 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 CHRNB2P17787 502 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 TACR2P21452 398 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 HLA-FP30511 346 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 CCR1P32246 355 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 NOS2P35228 1153 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 MATKP42679 507 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 GABRB2P47870 512 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 RPS24P62847 133 aaKnown RBP13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 NOMO3P69849 1222 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 FMO1Q01740 532 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 IQCB1Q15051 598 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 ZSCAN23Q3MJ62 389 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 MS4A13Q5J8X5 152 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 MPP7Q5T2T1 576 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 MMS22LQ6ZRQ5 1243 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 PHLDB2Q86SQ0 1253 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 LUZP1Q86V48 1076 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 XYLT1Q86Y38 959 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 LGI2Q8N0V4 545 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 CARNMT1Q8N4J0 409 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 FAM160A2Q8N612 972 aaPredicted RBP13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 ATP6V0D2Q8N8Y2 350 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 ZNF397Q8NF99 534 aaPredicted RBP13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 SLC30A5Q8TAD4 765 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 MYEOVQ96EZ4 313 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 ELOVL2Q9NXB9 296 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 GGA2Q9UJY4 613 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 STAP1Q9ULZ2 295 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 USP18Q9UMW8 372 aa13.08□□□□□ -0.32
PPP1R3F-204ENST00000471261 OTOGLQ3ZCN5 2332 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 KCNU1A8MYU2 1149 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 F5H5T6 163 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 SYNCRIPO60506 623 aaKnown RBP13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 RETP07949 1114 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 PABPC1P11940 636 aaKnown RBP13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 NSFP46459 744 aaKnown RBP13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 SULT1E1P49888 294 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 SPEM2Q0P670 501 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 CDH18Q13634 790 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 STARD3Q14849 445 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 EIF4HQ15056 248 aaKnown RBP13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 ELF2Q15723 593 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 SKOR2Q2VWA4 1001 aaPredicted RBP13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 TMEM215Q68D42 235 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 KIAA1211LQ6NV74 962 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 SND1Q7KZF4 910 aaKnown RBP eCLIP13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 CHST9Q7L1S5 443 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 WFDC5Q8TCV5 224 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 CYB5D2Q8WUJ1 264 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 RLN3Q8WXF3 142 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 NAP1L5Q96NT1 182 aaPredicted RBP13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 GABRG3Q99928 467 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 THAP10Q9P2Z0 257 aaPredicted RBP13.07□□□□□ -0.32
PPP1R3F-204ENST00000471261 PLA2G4CQ9UP65 541 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms