RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SYNCRIPO60506 623 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 LILRB5O75023 590 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 HRGP04196 525 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 PLA2G4BP0C869 781 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 SLURP2P0DP57 97 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 COL6A2P12110 1019 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 TCF7P36402 384 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ARCN1P48444 511 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 CAMLGP49069 296 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 BACE1P56817 501 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ARF3P61204 181 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 SNRPFP62306 86 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 KCNJ10P78508 379 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ARF1P84077 181 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 YWHAHQ04917 246 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 TUBB2AQ13885 445 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ODF2Q5BJF6 829 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 USP50Q70EL3 339 aaPredicted RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 OTOP1Q7RTM1 612 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 KCNK18Q7Z418 384 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 BNIPLQ7Z465 357 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 R3HCC1LQ7Z5L2 792 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 REXO1L1PQ8IX06 675 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 GALNT15Q8N3T1 639 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 MB21D1Q8N884 522 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 OR6P1Q8NGX9 317 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 ZC3H10Q96K80 434 aaKnown RBP8.08□□□□□ -1.12
BRCC3-208ENST00000453705 SH3GL3Q99963 347 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 MXRA8Q9BRK3 442 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 TUBB2BQ9BVA1 445 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 PCED1AQ9H1Q7 454 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 CAPN11Q9UMQ6 739 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 MED16Q9Y2X0 877 aa8.08□□□□□ -1.12
BRCC3-208ENST00000453705 GOLGA6L7A0A1B0GV03 622 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 GLTPD2A6NH11 291 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 POTEMA6NI47 508 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 SLC16A3O15427 465 aaKnown RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 MED24O75448 989 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 SLITRK3O94933 977 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 IVLP07476 585 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 CDK4P11802 303 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ARF4P18085 180 aaPredicted RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 JAK1P23458 1154 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 CASP1P29466 404 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 CCT6AP40227 531 aaKnown RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 CETN1Q12798 172 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 STK4Q13043 487 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ALCAMQ13740 583 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 DHX34Q14147 1143 aaKnown RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 PTK2BQ14289 1009 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 GNA13Q14344 377 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 GLE1Q53GS7 698 aaKnown RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 MIIPQ5JXC2 388 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 KLC3Q6P597 504 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 GANCQ8TET4 914 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 RFFLQ8WZ73 363 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ATP2A3Q93084 1043 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 SAMD11Q96NU1 681 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ARHGAP9Q9BRR9 750 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 SENP6Q9GZR1 1112 aaPredicted RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 SEMA6BQ9H3T3 888 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 MYO1AQ9UBC5 1043 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 SLC13A4Q9UKG4 626 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 AURKCQ9UQB9 309 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 NFASCO94856 1347 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 EIF3CLB5ME19 914 aaKnown RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ADAM20O43506 726 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ERLIN1O75477 346 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ERLIN2O94905 339 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 TPOP07202 933 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 PTPRAP18433 802 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ABCD3P28288 659 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 PTGS2P35354 604 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 CNGA2Q16280 664 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 MAN2A1Q16706 1144 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 PRR16Q569H4 304 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 MPP7Q5T2T1 576 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 CEP128Q6ZU80 1094 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 NANOGNBQ7Z5D8 188 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 CATSPER3Q86XQ3 398 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 KIAA0319LQ8IZA0 1049 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 NIPA2Q8N8Q9 360 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 SLC17A8Q8NDX2 589 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 TRIM58Q8NG06 486 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 URGCPQ8TCY9 931 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 PPP1R14AQ96A00 147 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ZNF669Q96BR6 464 aaPredicted RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 PPP1R14BQ96C90 147 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 TMEM41AQ96HV5 264 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 C7orf26Q96N11 449 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 EIF3CQ99613 913 aaKnown RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 TSG101Q99816 390 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 PPP1R14DQ9NXH3 145 aa8.07□□□□□ -1.12
BRCC3-208ENST00000453705 ASTN2O75129 1339 aaPredicted RBP8.07□□□□□ -1.12
BRCC3-208ENST00000453705 FGF18O76093 207 aa8.06□□□□□ -1.12
BRCC3-208ENST00000453705 GYPCP04921 128 aa8.06□□□□□ -1.12
BRCC3-208ENST00000453705 GLI1P08151 1106 aa8.06□□□□□ -1.12
BRCC3-208ENST00000453705 PNMA6AP0CW24 399 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms