RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 IGHV1OR15-9A0A0B4J2B8 117 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 GOLGA6L7A0A1B0GV03 622 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 KCNJ18B7U540 433 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 GLI1P08151 1106 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 C7P10643 843 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 EEF1GP26641 437 aaKnown RBP20.15■□□□□ 0.82
USP40-207ENST00000450940 DPP6P42658 865 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 PTGER3P43115 390 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 KCNJ12Q14500 433 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 STARD3Q14849 445 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 FUT11Q495W5 492 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 PEAR1Q5VY43 1037 aaPredicted RBP20.15■□□□□ 0.82
USP40-207ENST00000450940 RFWD3Q6PCD5 774 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 ADIPOR2Q86V24 386 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 ENOX1Q8TC92 643 aaKnown RBP20.15■□□□□ 0.82
USP40-207ENST00000450940 GPT2Q8TD30 523 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 DDX1Q92499 740 aaKnown RBP20.15■□□□□ 0.82
USP40-207ENST00000450940 CPXM1Q96SM3 734 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 DDX50Q9BQ39 737 aaKnown RBP20.15■□□□□ 0.82
USP40-207ENST00000450940 ASNSD1Q9NWL6 643 aa20.15■□□□□ 0.82
USP40-207ENST00000450940 KHNYNO15037 678 aaKnown RBP20.14■□□□□ 0.81
USP40-207ENST00000450940 AP5Z1O43299 807 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 HSP90AA4PQ58FG1 418 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 TCP11X2Q5H9J9 407 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 TAC4Q86UU9 113 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 SYT12Q8IV01 421 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 ZNF557Q8N988 423 aaPredicted RBP20.14■□□□□ 0.81
USP40-207ENST00000450940 SORCS1Q8WY21 1168 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 PPP1R13BQ96KQ4 1090 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 LMLNQ96KR4 655 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 GBP4Q96PP9 640 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 NAA15Q9BXJ9 866 aaKnown RBP20.14■□□□□ 0.81
USP40-207ENST00000450940 CIPCQ9C0C6 399 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 MKRN2Q9H000 416 aaKnown RBP20.14■□□□□ 0.81
USP40-207ENST00000450940 TJP2Q9UDY2 1190 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 EVLQ9UI08 416 aaPredicted RBP20.14■□□□□ 0.81
USP40-207ENST00000450940 GGA2Q9UJY4 613 aa20.14■□□□□ 0.81
USP40-207ENST00000450940 CNOT1A5YKK6 2376 aaKnown RBP20.14■□□□□ 0.81
USP40-207ENST00000450940 LNP1A1A4G5 178 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 CAPN9O14815 690 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 TBL1XO60907 577 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 TRUB2O95900 331 aaKnown RBP20.13■□□□□ 0.81
USP40-207ENST00000450940 PABPC1P11940 636 aaKnown RBP20.13■□□□□ 0.81
USP40-207ENST00000450940 PRKCHP24723 683 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 HOXD12P35452 270 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 BPIFB4P59827 614 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 TAF5Q15542 800 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 KLHDC7AQ5VTJ3 777 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 LYSMD4Q5XG99 296 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 SLC47A2Q86VL8 602 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 AHI1Q8N157 1196 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 HJURPQ8NCD3 748 aaPredicted RBP20.13■□□□□ 0.81
USP40-207ENST00000450940 FIBINQ8TAL6 211 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 ADAM32Q8TC27 787 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 WFDC5Q8TCV5 224 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 PIGKQ92643 395 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 PRICKLE1Q96MT3 831 aaPredicted RBP20.13■□□□□ 0.81
USP40-207ENST00000450940 SLC2A13Q96QE2 648 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 SLC6A17Q9H1V8 727 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 TMEM245Q9H330 911 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 PRDM16Q9HAZ2 1276 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 ITM2CQ9NQX7 267 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 TMEM74BQ9NUR3 256 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 ABCB8Q9NUT2 735 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 USP36Q9P275 1121 aaKnown RBP20.13■□□□□ 0.81
USP40-207ENST00000450940 PILRBQ9UKJ0 227 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 NFE2L3Q9Y4A8 694 aa20.13■□□□□ 0.81
USP40-207ENST00000450940 PATE3B3GLJ2 98 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 KRT9P35527 623 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 COPAP53621 1224 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 RPL6Q02878 288 aaKnown RBP20.12■□□□□ 0.81
USP40-207ENST00000450940 CAMK2GQ13555 558 aaPredicted RBP20.12■□□□□ 0.81
USP40-207ENST00000450940 DRAP1Q14919 205 aaPredicted RBP20.12■□□□□ 0.81
USP40-207ENST00000450940 MS4A13Q5J8X5 152 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 EFHC1Q5JVL4 640 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 CDKAL1Q5VV42 579 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 IL31Q6EBC2 164 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 SERPINA13PQ6UXR4 307 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 CHST9Q7L1S5 443 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 MYEOVQ96EZ4 313 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 ZNF419Q96HQ0 510 aaPredicted RBP20.12■□□□□ 0.81
USP40-207ENST00000450940 NOX5Q96PH1 765 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 EDEM2Q9BV94 578 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 CYP8B1Q9UNU6 501 aa20.12■□□□□ 0.81
USP40-207ENST00000450940 SYNCRIPO60506 623 aaKnown RBP20.11■□□□□ 0.81
USP40-207ENST00000450940 HSF2BPO75031 334 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 IGLV3-19P01714 112 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 DLDP09622 509 aaKnown RBP20.11■□□□□ 0.81
USP40-207ENST00000450940 PNMA6AP0CW24 399 aaPredicted RBP20.11■□□□□ 0.81
USP40-207ENST00000450940 CD70P32970 193 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 CDH5P33151 784 aaPredicted RBP20.11■□□□□ 0.81
USP40-207ENST00000450940 SNX16P57768 344 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 PITX1P78337 314 aaPredicted RBP20.11■□□□□ 0.81
USP40-207ENST00000450940 IRX4P78413 519 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 ZNF33AQ06730 810 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 PTPRNQ16849 979 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 ZC3H12AQ5D1E8 599 aaKnown RBP20.11■□□□□ 0.81
USP40-207ENST00000450940 MBLAC2Q68D91 279 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 SLC23A3Q6PIS1 610 aa20.11■□□□□ 0.81
USP40-207ENST00000450940 OLFML1Q6UWY5 402 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms