RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TRDMT1O14717 391 aaKnown RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 ZBED1O96006 694 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 ABCE1P61221 599 aaKnown RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 CLDN10P78369 228 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 CEACAM7Q14002 265 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 TMEM143Q96AN5 459 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 PGLYRP2Q96PD5 576 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 CPXM1Q96SM3 734 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 RTKNQ9BST9 563 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 FRMD8P1Q9BZ68 369 aaPredicted RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 EPS15L1Q9UBC2 864 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 C7orf72A4D263 438 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 FAM159BA6NKW6 160 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 GRAP2O75791 330 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 RNASEH2AO75792 299 aaKnown RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 RAP1GAPP47736 663 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 TAP1Q03518 808 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 BNC2Q6ZN30 1099 aaPredicted RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 TICAM1Q8IUC6 712 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 MYO1HQ8N1T3 1032 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 TMEM130Q8N3G9 435 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 RNF169Q8NCN4 708 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 TAAR1Q96RJ0 339 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 MTMR12Q9C0I1 747 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 KLC2Q9H0B6 622 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 PAK5Q9P286 719 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 ARHGAP28Q9P2N2 729 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 CNTN6Q9UQ52 1028 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 SH3PXD2BA1X283 911 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 METTL18O95568 372 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 HSPA4LO95757 839 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 CDK9P50750 372 aaKnown RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 SLC5A3P53794 718 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 WDR78Q5VTH9 848 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 GRAMD4Q6IC98 578 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 BORAQ6PGQ7 559 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 ELMSAN1Q6PJG2 1045 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 Q6ZNX1 250 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 ADCY4Q8NFM4 1077 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 CHURC1Q8WUH1 139 aa14.34□□□□□ -0.11
VPS52-212ENST00000445902 NTPCRQ9BSD7 190 aaKnown RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 STN1Q9H668 368 aaKnown RBP14.34□□□□□ -0.11
VPS52-212ENST00000445902 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS52-212ENST00000445902 WDR27A2RRH5 827 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 LRRIQ4A6NIV6 560 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 LSM8O95777 96 aaKnown RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 TRUB2O95900 331 aaKnown RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 HMGCRP04035 888 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 PIK3R1P27986 724 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 TNFSF9P41273 254 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 DPP6P42658 865 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 MTA1Q13330 715 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 TAZQ16635 292 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 C15orf59Q2T9L4 293 aaPredicted RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 MTERF2Q49AM1 385 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 FSCBQ5H9T9 825 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 FASTKD5Q7L8L6 764 aaKnown RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 CMC1Q7Z7K0 106 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 CLVS1Q8IUQ0 354 aaPredicted RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 LRRC43Q8N309 656 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 TMA16Q96EY4 203 aaKnown RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 SIGLEC10Q96LC7 697 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 EBNA1BP2Q99848 306 aaKnown RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 SLC4A5Q9BY07 1137 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ARMC7Q9H6L4 198 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 RSAD1Q9HA92 442 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 XPNPEP3Q9NQH7 507 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ANKEF1Q9NU02 776 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 FBXO40Q9UH90 709 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 UBIAD1Q9Y5Z9 338 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 QSER1Q2KHR3 1735 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 GLRA3O75311 464 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ERBB2P04626 1255 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 PRKCGP05129 697 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 EDN1P05305 212 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ZNF23P17027 643 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ACAT1P24752 427 aaKnown RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 CCR10P46092 362 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ZNF423Q2M1K9 1284 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 IL23RQ5VWK5 629 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 PPP1R2P3Q6NXS1 205 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 SCYL2Q6P3W7 929 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 PACS1Q6VY07 963 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 NAPRTQ6XQN6 538 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ZNF534Q76KX8 674 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 HACE1Q8IYU2 909 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 KYQ8NBH2 561 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 CMASQ8NFW8 434 aaPredicted RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 CERKQ8TCT0 537 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 ATP6V1E2Q96A05 226 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 PPP1R14BQ96C90 147 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 SERPINI1Q99574 410 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 TMEM79Q9BSE2 394 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 SDCBP2Q9H190 292 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 DHX33Q9H6R0 707 aaKnown RBP14.33□□□□□ -0.12
VPS52-212ENST00000445902 PLGRKTQ9HBL7 147 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 SELENONQ9NZV5 590 aa14.33□□□□□ -0.12
VPS52-212ENST00000445902 NXF1Q9UBU9 619 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms