RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 ADAM32Q8TC27 787 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 GANCQ8TET4 914 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 CRACR2AQ9BSW2 395 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 CD248Q9HCU0 757 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 SUSD2Q9UGT4 822 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 GGA2Q9UJY4 613 aa12.52□□□□□ -0.41
TTC3-208ENST00000428693 TNRC6BQ9UPQ9 1833 aaKnown RBP12.52□□□□□ -0.41
TTC3-208ENST00000428693 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 P4HA2O15460 535 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 THAP12O43422 761 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 FBXO21O94952 628 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 FGFR1OPO95684 399 aaKnown RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 ATP5BP06576 529 aaKnown RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 POLR2EP19388 210 aaKnown RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 CSRP1P21291 193 aaKnown RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 HLA-FP30511 346 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 OXTRP30559 389 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 TPMTP51580 245 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 SGSHP51688 502 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 ZNF445P59923 1031 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 SIM1P81133 766 aaPredicted RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 ARHGAP44Q17R89 818 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 PKDCCQ504Y2 493 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 DCAF12L1Q5VU92 463 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 NUGGCQ68CJ6 796 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 MBLAC2Q68D91 279 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 MFN1Q8IWA4 741 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 ELOA2Q8IYF1 753 aaPredicted RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 AHI1Q8N157 1196 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 CARNMT1Q8N4J0 409 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 ZCCHC9Q8N567 271 aaKnown RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 WFIKKN2Q8TEU8 576 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 IRGQQ8WZA9 623 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 ZNF419Q96HQ0 510 aaPredicted RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 HSFY1Q96LI6 401 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 ITM2CQ9NQX7 267 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 WSB2Q9NYS7 404 aaPredicted RBP12.51□□□□□ -0.41
TTC3-208ENST00000428693 CEP83Q9Y592 693 aa12.51□□□□□ -0.41
TTC3-208ENST00000428693 CACNA1EQ15878 2313 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 SYNJ2BP-COX16A0A087WUM0 186 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 KCNJ18B7U540 433 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 PMM2O15305 246 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 MED7O43513 233 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 ACSL4O60488 711 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 TOP3BO95985 862 aaKnown RBP12.5□□□□□ -0.41
TTC3-208ENST00000428693 PABPC1P11940 636 aaKnown RBP12.5□□□□□ -0.41
TTC3-208ENST00000428693 ZNF132P52740 706 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 GCNT1Q02742 428 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 TPD52L1Q16890 204 aaPredicted RBP12.5□□□□□ -0.41
TTC3-208ENST00000428693 PEAR1Q5VY43 1037 aaPredicted RBP12.5□□□□□ -0.41
TTC3-208ENST00000428693 DENND1BQ6P3S1 775 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 FAM217AQ8IXS0 508 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 OR2T3Q8NH03 318 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 LMO3Q8TAP4 145 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 KREMEN1Q96MU8 473 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 DDX50Q9BQ39 737 aaKnown RBP12.5□□□□□ -0.41
TTC3-208ENST00000428693 NUP58Q9BVL2 599 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 LHX5Q9H2C1 402 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 CAPN10Q9HC96 672 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 NAALADL1Q9UQQ1 740 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 PCDHB9Q9Y5E1 797 aa12.5□□□□□ -0.41
TTC3-208ENST00000428693 GABBR2O75899 941 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 LATS1O95835 1130 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 DNTTP04053 509 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 GNA15P30679 374 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 SLC6A4P31645 630 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 CD70P32970 193 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 RDXP35241 583 aaKnown RBP12.49□□□□□ -0.41
TTC3-208ENST00000428693 NUMBP49757 651 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 COPAP53621 1224 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 ST8SIA6P61647 398 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 SHC2P98077 582 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 CDH18Q13634 790 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 PIK3R6Q5UE93 754 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 MSANTD2Q6P1R3 559 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 GJB7Q6PEY0 223 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 CFAP52Q8N1V2 620 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 SCML4Q8N228 414 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 HJURPQ8NCD3 748 aaPredicted RBP12.49□□□□□ -0.41
TTC3-208ENST00000428693 DQX1Q8TE96 717 aaKnown RBP12.49□□□□□ -0.41
TTC3-208ENST00000428693 RNF34Q969K3 372 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 SERPINB11Q96P15 392 aa12.49□□□□□ -0.41
TTC3-208ENST00000428693 USP36Q9P275 1121 aaKnown RBP12.49□□□□□ -0.41
TTC3-208ENST00000428693 EIF2B4Q9UI10 523 aaKnown RBP12.49□□□□□ -0.41
TTC3-208ENST00000428693 A0A1B0GTW7 788 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 FAM47DPA6NHR8 397 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 PCNX2A6NKB5 2137 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 C1QTNF9BB2RNN3 333 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 H0Y626 953 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 IRAK2O43187 625 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 HYAL3O43820 417 aaPredicted RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 APOEP02649 317 aa12.48□□□□□ -0.41
TTC3-208ENST00000428693 DLDP09622 509 aaKnown RBP12.48□□□□□ -0.41
TTC3-208ENST00000428693 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms