RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MTO1Q9Y2Z2 717 aaKnown RBP13.79□□□□□ -0.2
COL6A2-204ENST00000409416 F8W810 466 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 BEST1O76090 585 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 SNRPAP09012 282 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 TGFB3P10600 412 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 BDNFP23560 247 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 PLK1P53350 603 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 C1orf146Q5VVC0 180 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 SYPL2Q5VXT5 272 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 TRNP1Q6NT89 227 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 ADGRF2Q8IZF7 708 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 COLGALT1Q8NBJ5 622 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 OR52K1Q8NGK4 314 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 PCDH19Q8TAB3 1148 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 SCG3Q8WXD2 468 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 NACA2Q9H009 215 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 CYP4F12Q9HCS2 524 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 ABI2Q9NYB9 513 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 CNTN6Q9UQ52 1028 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 AK5Q9Y6K8 562 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 TCRBV5S1A1TA0A578 114 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 DPPA5A6NC42 116 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 MSI1O43347 362 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 CILPO75339 1184 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 PIGRP01833 764 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 PIRTP0C851 137 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 THPOP40225 353 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 GPD2P43304 727 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 YWHAZP63104 245 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 POU6F1Q14863 301 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 CCDC14Q49A88 953 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 CRLF3Q8IUI8 442 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 FBXO27Q8NI29 283 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 PABPC5Q96DU9 382 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 ULBP1Q9BZM6 244 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 TAS2R1Q9NYW7 299 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 KPNA7A9QM74 516 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 SOAT2O75908 522 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 KLC1Q07866 573 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 UBAP2LQ14157 1087 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 HSP90AA5PQ58FG0 334 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 RASSF3Q86WH2 238 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 MAB21L3Q8N8X9 362 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 SLC44A1Q8WWI5 657 aa13.78□□□□□ -0.2
COL6A2-204ENST00000409416 DDX50Q9BQ39 737 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 DDX43Q9NXZ2 648 aaKnown RBP13.78□□□□□ -0.2
COL6A2-204ENST00000409416 SPDYE5A6NIY4 337 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 MDM4O15151 490 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 PHGDHO43175 533 aaKnown RBP13.77□□□□□ -0.2
COL6A2-204ENST00000409416 NME5P56597 212 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 ARHGAP1Q07960 439 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 WASHC2DQ5SRD0 308 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 THEMIS2Q5TEJ8 643 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 ETAA1Q9NY74 926 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 WDR35Q9P2L0 1181 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 SLC39A10Q9ULF5 831 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 PCDHGC3Q9UN70 934 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 TNFSF13BQ9Y275 285 aa13.77□□□□□ -0.2
COL6A2-204ENST00000409416 NT5C1B-RDH14C9J2C7 533 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 PDE5AO76074 875 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 ZCCHC18P0CG32 403 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 SMIM10L2AP0DMW4 78 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 SMIM10L2BP0DMW5 78 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 TUBP50607 506 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 TPI1P60174 286 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 MAP3K10Q02779 954 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 TARBP2Q15633 366 aaKnown RBP13.77□□□□□ -0.21
COL6A2-204ENST00000409416 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 PLD5Q8N7P1 536 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 PPCSQ9HAB8 311 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 PCDH18Q9HCL0 1135 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 PAK5Q9P286 719 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 ZBTB42B2RXF5 422 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 EEF2KO00418 725 aaKnown RBP13.77□□□□□ -0.21
COL6A2-204ENST00000409416 MAP3K7O43318 606 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 SMNDC1O75940 238 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL6A2-204ENST00000409416 USP1O94782 785 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 STK10O94804 968 aaKnown RBP13.77□□□□□ -0.21
COL6A2-204ENST00000409416 CSH1P0DML2 217 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 CSH2P0DML3 217 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 STIP1P31948 543 aaKnown RBP13.77□□□□□ -0.21
COL6A2-204ENST00000409416 SERPINB6P35237 376 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 VHLP40337 213 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 POLE2P56282 527 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 SLC12A1Q13621 1099 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 LAYNQ6UX15 382 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 SDCCAG8Q86SQ7 713 aaPredicted RBP13.77□□□□□ -0.21
COL6A2-204ENST00000409416 C2orf69Q8N8R5 385 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 RNF157Q96PX1 679 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 TINF2Q9BSI4 451 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 PRDM12Q9H4Q4 367 aa13.77□□□□□ -0.21
COL6A2-204ENST00000409416 CCDC160A6NGH7 325 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 E9PBE3 544 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 KLHL41O60662 606 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 KRT38O76015 456 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 BLMHQ13867 455 aa13.76□□□□□ -0.21
COL6A2-204ENST00000409416 NOMO1Q15155 1222 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms