RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 HTR3CQ8WXA8 447 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 NMD3Q96D46 503 aaKnown RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 KIAA1683Q9H0B3 1180 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ATRNL1Q5VV63 1379 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 VWA5AO00534 786 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 TADA2AO75478 443 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PSMD10O75832 226 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 CYBBP04839 570 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 HOXB8P17481 243 aaPredicted RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 CLCN3P51790 818 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 SNAPC2Q13487 334 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 GSTA3Q16772 222 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 GLB1LQ6UWU2 654 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 MAGEC3Q8TD91 643 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 SLITRK1Q96PX8 696 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 VAT1Q99536 393 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PALMDQ9NP74 551 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 LSM7Q9UK45 103 aaKnown RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 SATB2Q9UPW6 733 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ANKRD6Q9Y2G4 727 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ADGRA2Q96PE1 1338 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 C2orf81A6NN90 581 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 KDELR1P24390 212 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 CRABP2P29373 138 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 MIPP30301 263 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 AKT1P31749 480 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 RPA3P35244 121 aaPredicted RBP8.6□□□□□ -1.03
VPS36-201ENST00000378060 GLRBP48167 497 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 MMRN1Q13201 1228 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 NFYCQ13952 458 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 MFSD5Q6N075 450 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 PALB2Q86YC2 1186 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 ACMSDQ8TDX5 336 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 SH3KBP1Q96B97 665 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 GPR63Q9BZJ6 419 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 GPAMQ9HCL2 828 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 TMEM161AQ9NX61 479 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 TAS2R14Q9NYV8 317 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 CROTQ9UKG9 612 aa8.6□□□□□ -1.03
VPS36-201ENST00000378060 A0A096LPK6 155 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 SIGLEC16A6NMB1 481 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ZNF839A8K0R7 811 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ERI2A8K979 691 aaKnown RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 ACKR2O00590 384 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 C2CD2LO14523 706 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 LIASO43766 372 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ITGAVP06756 1048 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 HLA-DPA1P20036 260 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 PAX7P23759 505 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 RGS2P41220 211 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 CD151P48509 253 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 OAZ1P54368 228 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 LAMTOR4Q0VGL1 99 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ARCQ7LC44 396 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 NET1Q7Z628 596 aaPredicted RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 RAB42Q8N4Z0 105 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 RMND5BQ96G75 393 aaPredicted RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 MAGED4Q96JG8 741 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 PURBQ96QR8 312 aaKnown RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 RABGEF1Q9UJ41 708 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 TSR3Q9UJK0 312 aaKnown RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 ATAD5Q96QE3 1844 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 HTTP42858 3142 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ABLIM1O14639 778 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ODC1P11926 461 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 FECHP22830 423 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 TTKP33981 857 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 KCNJ2P63252 427 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 LACTB2Q53H82 288 aaPredicted RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 LPCAT2Q7L5N7 544 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 POLNQ7Z5Q5 900 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 GPRC5AQ8NFJ5 357 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 OSCP1Q8WVF1 389 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 VPS33AQ96AX1 596 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 TMEM79Q9BSE2 394 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 LRMDAQ9H2I8 198 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 STN1Q9H668 368 aaKnown RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 ACSS3Q9H6R3 686 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 TBC1D13Q9NVG8 400 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ARMCX1Q9P291 453 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 TSPAN16Q9UKR8 245 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 RNF112Q9ULX5 631 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 WFS1O76024 890 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 VCAM1P19320 739 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 PPIDQ08752 370 aaKnown RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 TWF1Q12792 350 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ORC1Q13415 861 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 MSLNQ13421 630 aaPredicted RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 MAMLD1Q13495 774 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 ZRANB3Q5FWF4 1079 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 SAMD4BQ5PRF9 694 aaKnown RBP8.59□□□□□ -1.03
VPS36-201ENST00000378060 BBS12Q6ZW61 710 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 LRRC8DQ7L1W4 858 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 C12orf56Q8IXR9 622 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 KAT5Q92993 513 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 BDH2Q9BUT1 245 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 SLC25A23Q9BV35 468 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 TMEM109Q9BVC6 243 aa8.59□□□□□ -1.03
VPS36-201ENST00000378060 EXOSC4Q9NPD3 245 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms