RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ABCB8Q9NUT2 735 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 WSB2Q9NYS7 404 aaPredicted RBP14.81□□□□□ -0.04
NELFE-201ENST00000375425 USP36Q9P275 1121 aaKnown RBP14.81□□□□□ -0.04
NELFE-201ENST00000375425 NAALADL1Q9UQQ1 740 aa14.81□□□□□ -0.04
NELFE-201ENST00000375425 IRAK2O43187 625 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 MED7O43513 233 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 ACSL4O60488 711 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 TBL1XO60907 577 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 LETM1O95202 739 aaPredicted RBP14.8□□□□□ -0.04
NELFE-201ENST00000375425 HLA-EP13747 358 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 SLC9A1P19634 815 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 CSRP1P21291 193 aaKnown RBP14.8□□□□□ -0.04
NELFE-201ENST00000375425 MAOBP27338 520 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 SLC6A4P31645 630 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 ACADSBP45954 432 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 TPMTP51580 245 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 ATXN3P54252 364 aaPredicted RBP14.8□□□□□ -0.04
NELFE-201ENST00000375425 RING1Q06587 406 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 MPP7Q5T2T1 576 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 SYCP2LQ5T4T6 812 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 GJB7Q6PEY0 223 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 CHST9Q7L1S5 443 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 ENOSF1Q7L5Y1 443 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 KIAA0907Q7Z7F0 614 aaPredicted RBP14.8□□□□□ -0.04
NELFE-201ENST00000375425 ADIPOR2Q86V24 386 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 WFIKKN2Q8TEU8 576 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 STK32AQ8WU08 396 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 AZIN2Q96A70 460 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 FAM149B1Q96BN6 582 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 TMEM245Q9H330 911 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 ACP6Q9NPH0 428 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 CYTH4Q9UIA0 394 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 GGA2Q9UJY4 613 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 FRYQ5TBA9 3013 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 EPG5Q9HCE0 2579 aa14.8□□□□□ -0.04
NELFE-201ENST00000375425 CHD8Q9HCK8 2581 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 PLXND1Q9Y4D7 1925 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 ARHGAP33O14559 1287 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 SART1O43290 800 aaKnown RBP14.79□□□□□ -0.04
NELFE-201ENST00000375425 ACADMP11310 421 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 PABPC1P11940 636 aaKnown RBP14.79□□□□□ -0.04
NELFE-201ENST00000375425 GNA15P30679 374 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 SHC2P98077 582 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 FNDC3BQ53EP0 1204 aaKnown RBP14.79□□□□□ -0.04
NELFE-201ENST00000375425 WDR45BQ5MNZ6 344 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 MBLAC2Q68D91 279 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 TRIM65Q6PJ69 517 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 TMEM110Q86TL2 294 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 AHI1Q8N157 1196 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 ZNF366Q8N895 744 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.79□□□□□ -0.04
NELFE-201ENST00000375425 DEFB124Q8NES8 71 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 ADAM32Q8TC27 787 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 WFDC5Q8TCV5 224 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 DQX1Q8TE96 717 aaKnown RBP14.79□□□□□ -0.04
NELFE-201ENST00000375425 FCRL2Q96LA5 508 aaPredicted RBP14.79□□□□□ -0.04
NELFE-201ENST00000375425 GPR174Q9BXC1 333 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 SLC4A5Q9BY07 1137 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 IRX2Q9BZI1 471 aaPredicted RBP14.79□□□□□ -0.04
NELFE-201ENST00000375425 STIM2Q9P246 746 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 TLR6Q9Y2C9 796 aa14.79□□□□□ -0.04
NELFE-201ENST00000375425 CAPN9O14815 690 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 PAPSS1O43252 624 aaPredicted RBP14.78□□□□□ -0.04
NELFE-201ENST00000375425 THAP12O43422 761 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 ATP5BP06576 529 aaKnown RBP14.78□□□□□ -0.04
NELFE-201ENST00000375425 DLDP09622 509 aaKnown RBP14.78□□□□□ -0.04
NELFE-201ENST00000375425 OXTRP30559 389 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 CD70P32970 193 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 USP8P40818 1118 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 APBA1Q02410 837 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 ZNF252P-AS1Q0IIN9 211 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 CAMK2GQ13555 558 aaPredicted RBP14.78□□□□□ -0.04
NELFE-201ENST00000375425 MEA1Q16626 185 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 PTPRNQ16849 979 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 ARHGAP44Q17R89 818 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 PLEKHG6Q3KR16 790 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 SYPL2Q5VXT5 272 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 NADSYN1Q6IA69 706 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 GBP6Q6ZN66 633 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 BEND5Q7L4P6 421 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 CACUL1Q86Y37 369 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 IRF2BP1Q8IU81 584 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 HDDC3Q8N4P3 179 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 CADM4Q8NFZ8 388 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 OR2T3Q8NH03 318 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 DNASE2BQ8WZ79 361 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 MYEOVQ96EZ4 313 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 FAM81BQ96LP2 452 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 SERPINB11Q96P15 392 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 DDX50Q9BQ39 737 aaKnown RBP14.78□□□□□ -0.04
NELFE-201ENST00000375425 NUP58Q9BVL2 599 aa14.78□□□□□ -0.04
NELFE-201ENST00000375425 PI4KAP42356 2102 aa14.77□□□□□ -0.04
NELFE-201ENST00000375425 BECN2A8MW95 431 aa14.77□□□□□ -0.04
NELFE-201ENST00000375425 E5RJQ4 531 aa14.77□□□□□ -0.04
NELFE-201ENST00000375425 OPHN1O60890 802 aa14.77□□□□□ -0.04
NELFE-201ENST00000375425 IGLV3-19P01714 112 aa14.77□□□□□ -0.04
NELFE-201ENST00000375425 SYPP08247 313 aa14.77□□□□□ -0.04
NELFE-201ENST00000375425 GNSP15586 552 aa14.77□□□□□ -0.04
NELFE-201ENST00000375425 RPS24P62847 133 aaKnown RBP14.77□□□□□ -0.04
NELFE-201ENST00000375425 SEMA3BQ13214 749 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms