RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 PLCB4Q15147 1175 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 FBXO16Q8IX29 292 aaPredicted RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 FAM86B1Q8N7N1 296 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 ZMIZ2Q8NF64 920 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 HASPINQ8TF76 798 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 CLP1Q92989 425 aaKnown RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 MSLNLQ96KJ4 702 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 C3orf30Q96M34 536 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 PAIP2Q9BPZ3 127 aaKnown RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 ETNK1Q9HBU6 452 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 PNPOQ9NVS9 261 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 SLC2A6Q9UGQ3 507 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 PHTF1Q9UMS5 762 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TDRKHQ9Y2W6 561 aaKnown RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 CEP192Q8TEP8 1941 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 A0A1W2PQJ5 194 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TPM3P06753 285 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 DNAJB2P25686 324 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 YWHABP31946 246 aaKnown RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 PTDSS1P48651 473 aaKnown RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 CDKN1CP49918 316 aaPredicted RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 IFITM3Q01628 133 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 PREPLQ4J6C6 727 aaPredicted RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 CCDC185Q8N715 623 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 FAM111AQ96PZ2 611 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 RMDN3Q96TC7 470 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 SORT1Q99523 831 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TLE6Q9H808 572 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 ZWILCHQ9H900 591 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 CASS4Q9NQ75 786 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TMOD2Q9NZR1 351 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 ZNF225Q9UK10 706 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 PCNX2A6NKB5 2137 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 F2P00734 622 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 DR1Q01658 176 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TLE2Q04725 743 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 DUSP28Q4G0W2 176 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TFB1MQ8WVM0 346 aaKnown RBP5.85□□□□□ -1.47
CD47-201ENST00000355354 NLRP7Q8WX94 980 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 ART4Q93070 314 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 TMLHEQ9NVH6 421 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 KCTD3Q9Y597 815 aa5.85□□□□□ -1.47
CD47-201ENST00000355354 ESYT2A0FGR8 921 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 MBLAC1A4D2B0 266 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 A6NHS1 94 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CCT8L1PA6NM43 557 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TTC4O95801 387 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 BAG3O95817 575 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ZNF286BP0CG31 522 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ALADP13716 330 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 FOXA1P55317 472 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 HDAC4P56524 1084 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 FAM189BP81408 668 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CDK17Q00537 523 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ACVR2BQ13705 512 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TAF1BQ53T94 588 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 UGT3A1Q6NUS8 523 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ARMCX2Q7L311 632 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ZNF551Q7Z340 670 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 FBXO11Q86XK2 927 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ASIC4Q96FT7 647 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 RBM15Q96T37 977 aaKnown RBP eCLIP5.84□□□□□ -1.47
CD47-201ENST00000355354 ZNF577Q9BSK1 485 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 PAGR1Q9BTK6 254 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CARS2Q9HA77 564 aaKnown RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 ZDHHC4Q9NPG8 344 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TMEM216Q9P0N5 145 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 NEUROG3Q9Y4Z2 214 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 PCDHA11Q9Y5I1 949 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CCDC196A0A1B0GTZ2 297 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 NTN1O95631 604 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ASGR1P07306 291 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 AKR1A1P14550 325 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CD19P15391 556 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CKMT2P17540 419 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 PEX2P28328 305 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 RBL1P28749 1068 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TRAPPC10P48553 1259 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 PIGFQ07326 219 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 C16orf72Q14CZ0 275 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TCHHL1Q5QJ38 904 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 ADNP2Q6IQ32 1131 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TRPM8Q7Z2W7 1104 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 VSIG10LQ86VR7 867 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 VPS33AQ96AX1 596 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 OLFML3Q9NRN5 406 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TUBGCP4Q9UGJ1 667 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 COQ4Q9Y3A0 265 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ANO9A1A5B4 782 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 G3V3G9 751 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 UBFD1O14562 309 aaKnown RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 TBX18O95935 607 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 MYCP01106 439 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 PRLRP16471 622 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ADCYAP1R1P41586 468 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ELK3P41970 407 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 YAP1P46937 504 aaKnown RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 VAMP7P51809 220 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 GTF2A1P52655 376 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 EMP3P54852 163 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms