RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ANKRD20A8PQ5CZ79 823 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 CFAP58Q5T655 872 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 C8orf74Q6P047 294 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 CCDC149Q6ZUS6 474 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 GAREM2Q75VX8 874 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 C12orf50Q8NA57 414 aaPredicted RBP15.2■□□□□ 0.02
CXCL12-201ENST00000343575 GDPD5Q8WTR4 605 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 ARNTL2Q8WYA1 636 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 FCRL2Q96LA5 508 aaPredicted RBP15.2■□□□□ 0.02
CXCL12-201ENST00000343575 ZNF512Q96ME7 567 aaPredicted RBP15.2■□□□□ 0.02
CXCL12-201ENST00000343575 ZNF670Q9BS34 389 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 LRRC19Q9H756 370 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 DMGDHQ9UI17 866 aaKnown RBP15.2■□□□□ 0.02
CXCL12-201ENST00000343575 MSRAQ9UJ68 235 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 TLR6Q9Y2C9 796 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 SNX10Q9Y5X0 201 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 OBSL1O75147 1896 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 C2orf78A6NCI8 922 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 ZNF487B1APH4 448 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 KIF1CO43896 1103 aaKnown RBP15.2■□□□□ 0.02
CXCL12-201ENST00000343575 CST8O60676 142 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 LPXNO60711 386 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 RFPL2O75678 378 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 IGLV3-27P01718 113 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 GOT1P17174 413 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 GBP1P32455 592 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 AIF1P55008 147 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 KRT81Q14533 505 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 VEPH1Q14D04 833 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 C10orf120Q5SQS8 335 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 GSPT2Q8IYD1 628 aaKnown RBP15.2■□□□□ 0.02
CXCL12-201ENST00000343575 HS6ST3Q8IZP7 471 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 PLD5Q8N7P1 536 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 PDZD8Q8NEN9 1154 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 SERPINB11Q96P15 392 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 CSPG4P5Q96PW8 444 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 DCLK3Q9C098 648 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 RNF38Q9H0F5 515 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 GDF3Q9NR23 364 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 MARCH2Q9P0N8 246 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 AMACRQ9UHK6 382 aa15.2■□□□□ 0.02
CXCL12-201ENST00000343575 H0YHG0 523 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 RFXAPO00287 272 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 COCHO43405 550 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 RAD51CO43502 376 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 PHF2O75151 1096 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 TJP3O95049 919 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 C1RP00736 705 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 OAS1P00973 400 aaKnown RBP15.19■□□□□ 0.02
CXCL12-201ENST00000343575 PECAM1P16284 738 aaPredicted RBP15.19■□□□□ 0.02
CXCL12-201ENST00000343575 KCNJ1P48048 391 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 FNTAP49354 379 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 DYNLT1P63172 113 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 SLC7A5Q01650 507 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 PPP2R5DQ14738 602 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 SLC9A4Q6AI14 798 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 PDE12Q6L8Q7 609 aaKnown RBP15.19■□□□□ 0.02
CXCL12-201ENST00000343575 TAX1BP1Q86VP1 789 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 MIB1Q86YT6 1006 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 MAP7D3Q8IWC1 876 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 IQCKQ8N0W5 287 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 MAGOHBQ96A72 148 aaKnown RBP15.19■□□□□ 0.02
CXCL12-201ENST00000343575 GDAP1L1Q96MZ0 367 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 SLC28A3Q9HAS3 691 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 MAN1C1Q9NR34 630 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 OLA1Q9NTK5 396 aaKnown RBP15.19■□□□□ 0.02
CXCL12-201ENST00000343575 ETNK2Q9NVF9 386 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 NEU3Q9UQ49 428 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 DENND4CQ5VZ89 1909 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 NOTCH4Q99466 2003 aa15.19■□□□□ 0.02
CXCL12-201ENST00000343575 CCL16O15467 120 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 PAGE1O75459 146 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 CCR1P32246 355 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 CETN2P41208 172 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 PTGIRP43119 386 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 RGS19P49795 217 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 TRIP4Q15650 581 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-201ENST00000343575 ODF2Q5BJF6 829 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 TTMPQ5BVD1 217 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 BRMS1LQ5PSV4 323 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 KLHDC10Q6PID8 442 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 RBM23Q86U06 439 aaKnown RBP15.18■□□□□ 0.02
CXCL12-201ENST00000343575 ITIH5Q86UX2 942 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 HAUS1Q96CS2 278 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 SLC22A12Q96S37 553 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 ACTR5Q9H9F9 607 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-201ENST00000343575 HCFC1R1Q9NWW0 138 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 MFHAS1Q9Y4C4 1052 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 HCFC2Q9Y5Z7 792 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 CAPN7Q9Y6W3 813 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 ZSCAN5CA6NGD5 496 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-201ENST00000343575 BHMG1C9JSJ3 638 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-201ENST00000343575 CHUKO15111 745 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 LRG1P02750 347 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 AMPD1P23109 780 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 COILP38432 576 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-201ENST00000343575 CCR2P41597 374 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms