RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 A1CFQ9NQ94 594 aaKnown RBP16.76■□□□□ 0.27
PTCH1-201ENST00000331920 ARHGAP28Q9P2N2 729 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 ZNF615Q8N8J6 731 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 NSMCE2Q96MF7 247 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 INVSQ9Y283 1065 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 B3GAT3O94766 335 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 KCNH1O95259 989 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 GH1P01241 217 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 CTSEP14091 401 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 BGNP21810 368 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 FAAH2Q6GMR7 532 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 TRMT13Q9NUP7 481 aaKnown RBP16.76■□□□□ 0.27
PTCH1-201ENST00000331920 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 MCIDASD6RGH6 385 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 EYA4O95677 639 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 RAP1GAPP47736 663 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 ADARP55265 1226 aaKnown RBP16.76■□□□□ 0.27
PTCH1-201ENST00000331920 ACAP1Q15027 740 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 GNASQ5JWF2 1037 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 CCDC167Q9P0B6 97 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 SLC1A6P48664 564 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 CCDC54Q8NEL0 328 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 CPB2Q96IY4 423 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 EXOC2Q96KP1 924 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 PTGFRNQ9P2B2 879 aa16.76■□□□□ 0.27
PTCH1-201ENST00000331920 SDR42E2A6NKP2 422 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 RHOCP08134 193 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 ACO1P21399 889 aaKnown RBP16.75■□□□□ 0.27
PTCH1-201ENST00000331920 PKN1Q16512 942 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 HERC6Q8IVU3 1022 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 KLHL23Q8NBE8 558 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 TNFSF13BQ9Y275 285 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 PLEKHG1Q9ULL1 1385 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 UCHL3P15374 230 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 NPY2RP49146 381 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 PPP2R2BQ00005 443 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 CDC42EP1Q00587 391 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 OCLNQ16625 522 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
PTCH1-201ENST00000331920 CRISPLD1Q9H336 500 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 TIMM8BQ9Y5J9 83 aaPredicted RBP16.75■□□□□ 0.27
PTCH1-201ENST00000331920 AHCYL1O43865 530 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 IDH2P48735 452 aaKnown RBP16.75■□□□□ 0.27
PTCH1-201ENST00000331920 RPS6KA3P51812 740 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 PPP1R18Q6NYC8 613 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 PPCSQ9HAB8 311 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 TFR2Q9UP52 801 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 ZC3H7AQ8IWR0 971 aaKnown RBP16.75■□□□□ 0.27
PTCH1-201ENST00000331920 CCDC162PA2VCL2 907 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 OR10H2O60403 315 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 CALB2P22676 271 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 COILP38432 576 aaPredicted RBP16.75■□□□□ 0.27
PTCH1-201ENST00000331920 ARMC8Q8IUR7 673 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 MAGEB18Q96M61 343 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 NUP160Q12769 1436 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 CCNA2P20248 432 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 FASTKQ14296 549 aaKnown RBP16.75■□□□□ 0.27
PTCH1-201ENST00000331920 SLFN11Q7Z7L1 901 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 PACS2Q86VP3 889 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 ATG4AQ8WYN0 398 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 DHRS1Q96LJ7 313 aa16.75■□□□□ 0.27
PTCH1-201ENST00000331920 VPS4BO75351 444 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 PRKCEQ02156 737 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 PERM1Q5SV97 790 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 SUSD4Q5VX71 490 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 HIPK1Q86Z02 1210 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 TMEM159Q96B96 161 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ROPN1BQ9BZX4 212 aaPredicted RBP16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ROPN1Q9HAT0 212 aaPredicted RBP16.74■□□□□ 0.27
PTCH1-201ENST00000331920 SNAP23O00161 211 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 PPIDQ08752 370 aaKnown RBP16.74■□□□□ 0.27
PTCH1-201ENST00000331920 XRCC4Q13426 336 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 GPER1Q99527 375 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 MAT2BQ9NZL9 334 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 TAGLN3Q9UI15 199 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ANKARQ7Z5J8 1434 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 UBDO15205 165 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 RLN1P04808 185 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 CPT1AP50416 773 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 TFAP2DQ7Z6R9 452 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 TRIM2Q9C040 744 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 KIAA0232Q92628 1395 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 SLC2A3P11169 496 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 GUF1Q8N442 669 aaKnown RBP16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ABHD14A-ACY1A0A1B0GW23 586 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 FARP2O94887 1054 aaPredicted RBP16.74■□□□□ 0.27
PTCH1-201ENST00000331920 RFX4Q33E94 735 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 CITED4Q96RK1 184 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 CEP41Q9BYV8 373 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 GMEB1Q9Y692 573 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 MAGEB3O15480 346 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 TPBGLP0DKB5 382 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 CYP2C9P11712 490 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 RGS1Q08116 209 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 POM121L1PQ3SYA9 428 aa16.74■□□□□ 0.27
PTCH1-201ENST00000331920 EIF3MQ7L2H7 374 aaKnown RBP16.74■□□□□ 0.27
PTCH1-201ENST00000331920 ZNF655Q8N720 491 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms