RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FYTTD1Q96QD9 318 aaKnown RBP5.04□□□□□ -1.6
CCDC54-201ENST00000261058 SEPSECSQ9HD40 501 aaKnown RBP5.04□□□□□ -1.6
CCDC54-201ENST00000261058 TMLHEQ9NVH6 421 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 KCND3Q9UK17 655 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 LRRFIP2Q9Y608 721 aaKnown RBP5.04□□□□□ -1.6
CCDC54-201ENST00000261058 WNT6Q9Y6F9 365 aa5.04□□□□□ -1.6
CCDC54-201ENST00000261058 C3orf70A6NLC5 250 aaPredicted RBP5.03□□□□□ -1.6
CCDC54-201ENST00000261058 C16orf96A6NNT2 1141 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 E7EVH7 732 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 POC1B-GALNT4F8VUJ3 575 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 NCAM2O15394 837 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 CHRM5P08912 532 aaPredicted RBP5.03□□□□□ -1.6
CCDC54-201ENST00000261058 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
CCDC54-201ENST00000261058 CKMT1AP12532 417 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 NDUFS1P28331 727 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 HOXD12P35452 270 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 TAS2R50P59544 299 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 TFF2Q03403 129 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 KCNB1Q14721 858 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 FAM110CQ1W6H9 321 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 PROSER3Q2NL68 480 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 ZNF569Q5MCW4 686 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 WDR93Q6P2C0 686 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 DCDC5Q6ZRR9 648 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 GALNT4Q8N4A0 578 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 EXD3Q8N9H8 876 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 CSGALNACT1Q8TDX6 532 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 PNISRQ8TF01 805 aaKnown RBP5.03□□□□□ -1.6
CCDC54-201ENST00000261058 AKAP1Q92667 903 aaKnown RBP eCLIP5.03□□□□□ -1.6
CCDC54-201ENST00000261058 ZNF845Q96IR2 970 aaPredicted RBP5.03□□□□□ -1.6
CCDC54-201ENST00000261058 PYM1Q9BRP8 204 aaKnown RBP5.03□□□□□ -1.6
CCDC54-201ENST00000261058 BRD8Q9H0E9 1235 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 PDP2Q9P2J9 529 aa5.03□□□□□ -1.6
CCDC54-201ENST00000261058 TRPC5Q9UL62 973 aaPredicted RBP5.03□□□□□ -1.6
CCDC54-201ENST00000261058 EIF3FO00303 357 aaPredicted RBP5.02□□□□□ -1.61
CCDC54-201ENST00000261058 KAT7O95251 611 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 IGLV2-14P01704 120 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 PTH2RP49190 550 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 AARSP49588 968 aaKnown RBP eCLIP5.02□□□□□ -1.61
CCDC54-201ENST00000261058 AGTR2P50052 363 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 ZNF84P51523 738 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 PROK1P58294 105 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 NHLH1Q02575 133 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 RPS6KA2Q15349 733 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 SPATA31A5Q5VU36 1347 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 SPATA31A6Q5VVP1 1343 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 ANKRD40Q6AI12 368 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 CPOQ8IVL8 374 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 SPATA31A7Q8IWB4 1347 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 IL17REQ8NFR9 667 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 KTI12Q96EK9 354 aaPredicted RBP5.02□□□□□ -1.61
CCDC54-201ENST00000261058 ADGRE3Q9BY15 652 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 ARHGAP39Q9C0H5 1083 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 RAB21Q9UL25 225 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 VPS4AQ9UN37 437 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 GTF2A1LQ9UNN4 478 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 SLC12A4Q9UP95 1085 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 RCE1Q9Y256 329 aa5.02□□□□□ -1.61
CCDC54-201ENST00000261058 SIRT4Q9Y6E7 314 aaPredicted RBP5.02□□□□□ -1.61
CCDC54-201ENST00000261058 LRRC3CA6NJW4 275 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 CNPP09543 421 aaKnown RBP5.01□□□□□ -1.61
CCDC54-201ENST00000261058 SLC8A1P32418 973 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 GRK5P34947 590 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 STAT6P42226 847 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 PAPOLAP51003 745 aaKnown RBP5.01□□□□□ -1.61
CCDC54-201ENST00000261058 DMWDQ09019 674 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 SLC14A1Q13336 389 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 AKNAD1Q5T1N1 836 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 FCRLBQ6BAA4 426 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 TMEM65Q6PI78 240 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 LVRNQ6Q4G3 990 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 VSTM1Q6UX27 236 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 SLC39A5Q6ZMH5 540 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 LRRTM4Q86VH4 590 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 CHSY1Q86X52 802 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 PRIMA1Q86XR5 153 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 C2CD5Q86YS7 1000 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 PTGR2Q8N8N7 351 aaPredicted RBP5.01□□□□□ -1.61
CCDC54-201ENST00000261058 AFG1LQ8WV93 481 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 USP13Q92995 863 aaPredicted RBP5.01□□□□□ -1.61
CCDC54-201ENST00000261058 TBATAQ96M53 351 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 R3HDMLQ9H3Y0 253 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 PRDM16Q9HAZ2 1276 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 SLC22A11Q9NSA0 550 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 RRN3Q9NYV6 651 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 SH3BP4Q9P0V3 963 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 PI4KBQ9UBF8 816 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 B3GNT3Q9Y2A9 372 aa5.01□□□□□ -1.61
CCDC54-201ENST00000261058 A0A1B0GVC2 190 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 TISP43B9A030 160 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 UBE2Q2LH0YL09 131 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 HNRNPRO43390 633 aaKnown RBP5□□□□□ -1.61
CCDC54-201ENST00000261058 ALDOAP04075 364 aaKnown RBP5□□□□□ -1.61
CCDC54-201ENST00000261058 RCAN1P53805 252 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 CNGA3Q16281 694 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 MAP3K21Q5TCX8 1036 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 SUMO4Q6EEV6 95 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 TMEM88Q6PEY1 159 aa5□□□□□ -1.61
CCDC54-201ENST00000261058 BBS12Q6ZW61 710 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms