RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 UBR7Q8N806 425 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 RBBP8NLQ8NC74 664 aaPredicted RBP11.67□□□□□ -0.54
TARDBP-221ENST00000619555 DDI1Q8WTU0 396 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 UCMAQ8WVF2 138 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 EDEM1Q92611 657 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 TOE1Q96GM8 510 aaKnown RBP11.67□□□□□ -0.54
TARDBP-221ENST00000619555 SCNM1Q9BWG6 230 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 MKRN2Q9H000 416 aaKnown RBP11.67□□□□□ -0.54
TARDBP-221ENST00000619555 NUP62CLQ9H1M0 184 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 SLC32A1Q9H598 525 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 FAM124BQ9H5Z6 455 aaPredicted RBP11.67□□□□□ -0.54
TARDBP-221ENST00000619555 PRDM16Q9HAZ2 1276 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 LRRC4Q9HBW1 653 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 ELOVL2Q9NXB9 296 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 SFMBT1Q9UHJ3 866 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 CTNND2Q9UQB3 1225 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 CKAP5Q14008 2032 aa11.67□□□□□ -0.54
TARDBP-221ENST00000619555 PKD1L2Q7Z442 2459 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 YJEFN3A6XGL0 299 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 UPK3BL1B0FP48 263 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 KCNJ18B7U540 433 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 UPK3BL2E5RIL1 263 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 E7ENQ6 273 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 VDRP11473 427 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 CD59P13987 128 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 PRKCHP24723 683 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 BCAT1P54687 386 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 FAM193AP78312 1265 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 BST2Q10589 180 aaKnown RBP11.66□□□□□ -0.54
TARDBP-221ENST00000619555 PLEKHG6Q3KR16 790 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 BSPRYQ5W0U4 402 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 TTI2Q6NXR4 508 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 RABEPKQ7Z6M1 372 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
TARDBP-221ENST00000619555 CACUL1Q86Y37 369 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 TMPRSS6Q8IU80 811 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 FAM217AQ8IXS0 508 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 TFAP2BQ92481 460 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 SLC35C1Q96A29 364 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 PLD4Q96BZ4 506 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 MED15Q96RN5 788 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 GPR174Q9BXC1 333 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
TARDBP-221ENST00000619555 ADAM33Q9BZ11 813 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 CIPCQ9C0C6 399 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 ITM2CQ9NQX7 267 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 WSB2Q9NYS7 404 aaPredicted RBP11.66□□□□□ -0.54
TARDBP-221ENST00000619555 USP36Q9P275 1121 aaKnown RBP11.66□□□□□ -0.54
TARDBP-221ENST00000619555 HESX1Q9UBX0 185 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 ARMCX3Q9UH62 379 aaPredicted RBP11.66□□□□□ -0.54
TARDBP-221ENST00000619555 ZZEF1O43149 2961 aa11.66□□□□□ -0.54
TARDBP-221ENST00000619555 GOLGA6L22H0YM25 854 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 RNF225M0QZC1 329 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 O00370 1275 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 PIK3R2O00459 728 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 NPC1O15118 1278 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 MSI1O43347 362 aaKnown RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 HYAL3O43820 417 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 SYNCRIPO60506 623 aaKnown RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 GABBR2O75899 941 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 CALCAP01258 141 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 SYPP08247 313 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 NCAM1P13591 858 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 HLA-EP13747 358 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 LCP1P13796 627 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 HOXD9P28356 352 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 HARS2P49590 506 aaKnown RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 RGS7P49802 495 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 TPMTP51580 245 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 COPAP53621 1224 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 STX17P56962 302 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 YWHAEP62258 255 aaKnown RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 SIM1P81133 766 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 PKDCCQ504Y2 493 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 MPPE1Q53F39 396 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 WDR45BQ5MNZ6 344 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 SYCP2LQ5T4T6 812 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 RBM43Q6ZSC3 357 aaKnown RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 SIX6OS1Q8N1H7 587 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 RNF139Q8WU17 664 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 NELFBQ8WX92 580 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 FOXJ1Q92949 421 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 KAT5Q92993 513 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 SIPA1Q96FS4 1042 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 DHTKD1Q96HY7 919 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 CAMK1GQ96NX5 476 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 ZSWIM1Q9BR11 485 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 SLC2A11Q9BYW1 496 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 OLA1Q9NTK5 396 aaKnown RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 RALYQ9UKM9 306 aaKnown RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
TARDBP-221ENST00000619555 HBS1LQ9Y450 684 aaKnown RBP11.65□□□□□ -0.54
TARDBP-221ENST00000619555 ANKRD11Q6UB99 2663 aaPredicted RBP11.64□□□□□ -0.55
TARDBP-221ENST00000619555 MEI4A8MW99 385 aa11.64□□□□□ -0.55
TARDBP-221ENST00000619555 PSMA7O14818 248 aa11.64□□□□□ -0.55
TARDBP-221ENST00000619555 TIMM44O43615 452 aa11.64□□□□□ -0.55
TARDBP-221ENST00000619555 SH3BP5O60239 455 aa11.64□□□□□ -0.55
TARDBP-221ENST00000619555 EPHX1P07099 455 aa11.64□□□□□ -0.55
TARDBP-221ENST00000619555 GNSP15586 552 aa11.64□□□□□ -0.55
TARDBP-221ENST00000619555 TBXAS1P24557 533 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms