RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MED15Q96RN5 788 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 CD93Q9NPY3 652 aa18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 USP36Q9P275 1121 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 THAP10Q9P2Z0 257 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-203ENST00000594298 GJB3O75712 270 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 GNSP15586 552 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 CORO1AP31146 461 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 RDXP35241 583 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 LRMPQ12912 555 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 E2F5Q15329 346 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 STX1AQ16623 288 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 GEN1Q17RS7 908 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 PLEKHG6Q3KR16 790 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 FUT11Q495W5 492 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 RAB41Q5JT25 222 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 WDR45BQ5MNZ6 344 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 KIAA1324Q6UXG2 1013 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 ARHGAP18Q8N392 663 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 DNASE2BQ8WZ79 361 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 ERLEC1Q96DZ1 483 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 HEXIM2Q96MH2 286 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 ITM2CQ9NQX7 267 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 CISHQ9NSE2 258 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 RASAL2Q9UJF2 1139 aa18.36■□□□□ 0.53
SHKBP1-203ENST00000594298 IL12RB1P42701 662 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 EIF4HQ15056 248 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 ZNF423Q2M1K9 1284 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 ZNF394Q53GI3 561 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 ARHGAP17Q68EM7 881 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 FAM217AQ8IXS0 508 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 RGL4Q8IZJ4 473 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 CPXM2Q8N436 756 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 CADM4Q8NFZ8 388 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 OR2I1PQ8NGU4 316 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 ENOX1Q8TC92 643 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 UCMAQ8WVF2 138 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 TMEM176AQ96HP8 235 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 PIWIL1Q96J94 861 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 ZDHHC5Q9C0B5 715 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 MKRN2Q9H000 416 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 PRDM16Q9HAZ2 1276 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 WSB2Q9NYS7 404 aaPredicted RBP18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 KLK13Q9UKR3 277 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 AGO1Q9UL18 857 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 ASCC3Q8N3C0 2202 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 MYO18AQ92614 2054 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 ASPMQ8IZT6 3477 aa18.35■□□□□ 0.53
SHKBP1-203ENST00000594298 SRRM3A6NNA2 597 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 IGLV3-19P01714 112 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 CYBBP04839 570 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 FAM193AP78312 1265 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 EFEMP1Q12805 493 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 ANKS1BQ7Z6G8 1248 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 PIGZQ86VD9 579 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 IRF2BP1Q8IU81 584 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 SLC4A11Q8NBS3 891 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 RBBP8NLQ8NC74 664 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 ZCCHC14Q8WYQ9 949 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 TOE1Q96GM8 510 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 FAM81BQ96LP2 452 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 SLC2A11Q9BYW1 496 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 MARCH2Q9P0N8 246 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 RALYQ9UKM9 306 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 STRIP2Q9ULQ0 834 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 CHD6Q8TD26 2715 aa18.34■□□□□ 0.53
SHKBP1-203ENST00000594298 LETM1O95202 739 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 EEF1GP26641 437 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 OXTRP30559 389 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 RAD23BP54727 409 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 YWHAGP61981 247 aaKnown RBP eCLIP18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 MAN2A1Q16706 1144 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 PM20D1Q6GTS8 502 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 GBP6Q6ZN66 633 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 RAB44Q7Z6P3 723 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 DENND1CQ8IV53 801 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 PPM1KQ8N3J5 372 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 ANKRD52Q8NB46 1076 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 LMO3Q8TAP4 145 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 INTS2Q9H0H0 1204 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 ELOVL2Q9NXB9 296 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 KIAA1257Q9ULG3 409 aa18.33■□□□□ 0.52
SHKBP1-203ENST00000594298 A0A1B0GTW7 788 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 GTPBP10A4D1E9 387 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 KCNJ18B7U540 433 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 TIMM44O43615 452 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 SH3BP5O60239 455 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 SYNCRIPO60506 623 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 TPM2P07951 284 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 HMBSP08397 361 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 NCAM1P13591 858 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 MAOBP27338 520 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 TPMTP51580 245 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 SLC8A3P57103 927 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 GCNT1Q02742 428 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 GRIK2Q13002 908 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 ZNF234Q14588 700 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 TRIP4Q15650 581 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 CAVIN1Q6NZI2 390 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 RSRC2Q7L4I2 434 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms