RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 PBX4Q9BYU1 374 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 FRMD8Q9BZ67 464 aaPredicted RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 TRIM7Q9C029 511 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 TTYH1Q9H313 450 aaPredicted RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 CDC42EP4Q9H3Q1 356 aaKnown RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 ACTR5Q9H9F9 607 aaPredicted RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 AGO3Q9H9G7 860 aaKnown RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 PRDM16Q9HAZ2 1276 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 PCDH9Q9HC56 1237 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 NPHS2Q9NP85 383 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 PPANQ9NQ55 473 aaKnown RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 RGS18Q9NS28 235 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 INTS9Q9NV88 658 aaKnown RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 SLC38A7Q9NVC3 462 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 DPP3Q9NY33 737 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 SENP1Q9P0U3 644 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 KANSL3Q9P2N6 904 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 FETUBQ9UGM5 382 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 LGALS13Q9UHV8 139 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 TPX2Q9ULW0 747 aaKnown RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 PADI3Q9ULW8 664 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 BARX2Q9UMQ3 279 aaPredicted RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 UBQLN1Q9UMX0 589 aaKnown RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 SHOC2Q9UQ13 582 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 PIN4Q9Y237 131 aaKnown RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 YBX2Q9Y2T7 364 aaKnown RBP5.99□□□□□ -1.45
SDF2-206ENST00000587788 AK5Q9Y6K8 562 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 REV3LO60673 3130 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 MYO9BQ13459 2157 aa5.99□□□□□ -1.45
SDF2-206ENST00000587788 hCG_1818297A0A087WSY0 165 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 SMIM28A0A1B0GU29 152 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 GOLGA6L7A0A1B0GV03 622 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 ARHGEF37A1IGU5 675 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 LRRD1A4D1F6 860 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ZNF487B1APH4 448 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ALOX15BO15296 676 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 TP73O15350 636 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 FSBPO95073 299 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 NPTXRO95502 500 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CALCAP01258 141 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 SHBGP04278 402 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 PFKMP08237 780 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 KRT19P08727 400 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CXCL8P10145 99 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 GHRP10912 638 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 FGFR4P22455 802 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CES1P23141 567 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 STIP1P31948 543 aaKnown RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 PHBP35232 272 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CDKN2BP42772 138 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 MAGEA4P43358 317 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ZNF143P52747 638 aaPredicted RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 SLC18A1P54219 525 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 OSTNP61366 133 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 RPL7AP62424 266 aaKnown RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 SMAD3P84022 425 aaKnown RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 TFDP2Q14188 446 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ITIH4Q14624 930 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 PDK2Q15119 407 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 P3H1Q32P28 736 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 TTC39BQ5VTQ0 682 aaPredicted RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 KIAA0319Q5VV43 1072 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 PEAR1Q5VY43 1037 aaPredicted RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 TTC19Q6DKK2 380 aaPredicted RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 JADE1Q6IE81 842 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 DENND1BQ6P3S1 775 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CNKSR3Q6P9H4 555 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 LCLAT1Q6UWP7 414 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 MFSD7Q6UXD7 560 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 PPP1R21Q6ZMI0 780 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ARHGEF18Q6ZSZ5 1173 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CCDC121Q6ZUS5 278 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CENPUQ71F23 418 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 SLC24A5Q71RS6 500 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 TADA2BQ86TJ2 420 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 FAM228AQ86W67 206 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 UNC93AQ86WB7 457 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CPNE8Q86YQ8 564 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 LRRC52Q8N7C0 313 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 SLC4A11Q8NBS3 891 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CCDC197Q8NCU1 140 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CMASQ8NFW8 434 aaPredicted RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 SLC35B2Q8TB61 432 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ATXN2LQ8WWM7 1075 aaKnown RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 LINC01599Q8WXQ3 324 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ATG4AQ8WYN0 398 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 TFAP2BQ92481 460 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ARHGEF2Q92974 986 aaKnown RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 CRELD1Q96HD1 420 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CABS1Q96KC9 395 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 HEXIM2Q96MH2 286 aaKnown RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 RBM15Q96T37 977 aaKnown RBP eCLIP5.98□□□□□ -1.45
SDF2-206ENST00000587788 TBCBQ99426 244 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 CNPY3Q9BT09 278 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 NT5C1AQ9BXI3 368 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 NKX2-4Q9H2Z4 354 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 C12orf49Q9H741 205 aa5.98□□□□□ -1.45
SDF2-206ENST00000587788 ELAC1Q9H777 363 aaKnown RBP5.98□□□□□ -1.45
SDF2-206ENST00000587788 RSAD1Q9HA92 442 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms