RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 MBD1Q9UIS9 605 aaPredicted RBP22.34■■□□□ 1.17
PPP4R1-228ENST00000584074 GOLGA6L7A0A1B0GV03 622 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 FOXN3O00409 490 aaPredicted RBP22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 PES1O00541 588 aaKnown RBP22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 FOXD2O60548 495 aaPredicted RBP22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 SGSHP51688 502 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 RING1Q06587 406 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 CT47A1Q5JQC4 288 aaPredicted RBP22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 SYPL2Q5VXT5 272 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 NUGGCQ68CJ6 796 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 UNC45BQ8IWX7 931 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 C12orf50Q8NA57 414 aaPredicted RBP22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 ADAM32Q8TC27 787 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 NETO1Q8TDF5 533 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 SPACA7Q96KW9 195 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 RXFP3Q9NSD7 469 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 ELOVL2Q9NXB9 296 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 CALCOCO1Q9P1Z2 691 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 STON1Q9Y6Q2 735 aa22.33■■□□□ 1.17
PPP4R1-228ENST00000584074 BCLAF3A2AJT9 711 aaKnown RBP22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 MAP3K13O43283 966 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 NDUFV2P19404 249 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 SLC6A4P31645 630 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 CLCN1P35523 988 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 SLC11A2P49281 568 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 ZNF445P59923 1031 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 PTK2Q05397 1052 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 KCNMA1Q12791 1236 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 TAF5Q15542 800 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 AASDHQ4L235 1098 aaPredicted RBP22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 FAM133BQ5BKY9 247 aaKnown RBP22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 TCP11X2Q5H9J9 407 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 TMEM215Q68D42 235 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 TCEAL6Q6IPX3 200 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 RFWD3Q6PCD5 774 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 SLC47A2Q86VL8 602 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 SORCS1Q8WY21 1168 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 TCEAL3Q969E4 200 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 FCRL2Q96LA5 508 aaPredicted RBP22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 SLC6A17Q9H1V8 727 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 VPS45Q9NRW7 570 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 THAP10Q9P2Z0 257 aaPredicted RBP22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 NFE2L3Q9Y4A8 694 aa22.32■■□□□ 1.16
PPP4R1-228ENST00000584074 SDK1Q7Z5N4 2213 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 CACNA1AO00555 2505 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 CAPN9O14815 690 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 ZBTB24O43167 697 aaPredicted RBP22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 ACSL4O60488 711 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 CAVIN2O95810 425 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 HLA-FP30511 346 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 IL12RB1P42701 662 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 DHPSP49366 369 aaPredicted RBP22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 YWHAZP63104 245 aaKnown RBP22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 FOXK2Q01167 660 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 BYSLQ13895 437 aaKnown RBP22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 NADSYN1Q6IA69 706 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 RBM43Q6ZSC3 357 aaKnown RBP22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 BEND5Q7L4P6 421 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 TAC4Q86UU9 113 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 TMEFF1Q8IYR6 380 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 SERPINB11Q96P15 392 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 CPXM1Q96SM3 734 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 CIPCQ9C0C6 399 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 PCDHGC3Q9UN70 934 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 TLR6Q9Y2C9 796 aa22.31■■□□□ 1.16
PPP4R1-228ENST00000584074 DCDC2BA2VCK2 349 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 SLC30A4O14863 429 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 EEF1GP26641 437 aaKnown RBP22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 EIF4HQ15056 248 aaKnown RBP22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 PIK3R6Q5UE93 754 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 LPCAT2Q7L5N7 544 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 FAM71AQ8IYT1 594 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 ENOX1Q8TC92 643 aaKnown RBP22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 UCMAQ8WVF2 138 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 AZIN2Q96A70 460 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 SLC39A13Q96H72 371 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 PPP1R13BQ96KQ4 1090 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 RTKNQ9BST9 563 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 TRIM62Q9BVG3 475 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 LHX5Q9H2C1 402 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 POPDC2Q9HBU9 364 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 TAB2Q9NYJ8 693 aa22.3■■□□□ 1.16
PPP4R1-228ENST00000584074 TBL1XO60907 577 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 KRT9P35527 623 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 PTGER3P43115 390 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 PITX1P78337 314 aaPredicted RBP22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 NNTQ13423 1086 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 ENPP2Q13822 863 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 RAPGEF1Q13905 1077 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 ZNF234Q14588 700 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 DRAP1Q14919 205 aaPredicted RBP22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 FUT11Q495W5 492 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 KLHDC7AQ5VTJ3 777 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 SMYD5Q6GMV2 418 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 ARMCX6Q7L4S7 300 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 CYP2U1Q7Z449 544 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 C1orf131Q8NDD1 294 aaKnown RBP22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 MYEOVQ96EZ4 313 aa22.29■■□□□ 1.16
PPP4R1-228ENST00000584074 MRGPRX1Q96LB2 322 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms