RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 ZNF18P17022 549 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 SLC11A2P49281 568 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 COPB1P53618 953 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 YWHAZP63104 245 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 EIF4HQ15056 248 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 GEN1Q17RS7 908 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 PTPN20Q4JDL3 420 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 FAM133BQ5BKY9 247 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 FAM183BPQ6ZVS7 135 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 KBTBD6Q86V97 674 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 C11orf74Q86VG3 221 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 CHPFQ8IZ52 775 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 ADAM32Q8TC27 787 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 EPS8L1Q8TE68 723 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 AZIN2Q96A70 460 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 SLC39A13Q96H72 371 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 FCRL2Q96LA5 508 aaPredicted RBP11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 STK33Q9BYT3 514 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 SLC2A11Q9BYW1 496 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 IRX2Q9BZI1 471 aaPredicted RBP11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 PDCL3Q9H2J4 239 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 SYNCQ9H7C4 482 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 BCCIPQ9P287 314 aaKnown RBP eCLIP11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 LIMA1Q9UHB6 759 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 USP18Q9UMW8 372 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 SPTBN4Q9H254 2564 aa11.37□□□□□ -0.59
PPP4R1-208ENST00000578178 CKAP5Q14008 2032 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 TYW5A2RUC4 315 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 NPC1O15118 1278 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 TSPAN3O60637 253 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 HSF2BPO75031 334 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 DAB1O75553 588 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 EPN2O95208 641 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 TRUB2O95900 331 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 APOEP02649 317 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 ERBB2P04626 1255 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 CDH5P33151 784 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 WASP42768 502 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 KLK7P49862 253 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 SNX16P57768 344 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 SPEM2Q0P670 501 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 NCAPHQ15003 741 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 E2F5Q15329 346 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 TAF5Q15542 800 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 ELF2Q15723 593 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 PLK5Q496M5 336 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 USP39Q53GS9 565 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 EFHC1Q5JVL4 640 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 SYPL2Q5VXT5 272 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 NADSYN1Q6IA69 706 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 SDE2Q6IQ49 451 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 CAVIN1Q6NZI2 390 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 OLFML1Q6UWY5 402 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 SLC26A9Q7LBE3 791 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 AOPEPQ8N6M6 819 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 TMEM35BQ8NCS4 154 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 OLIG1Q8TAK6 271 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 UCMAQ8WVF2 138 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 HMGB4Q8WW32 186 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 TMA16Q96EY4 203 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 LOXL4Q96JB6 756 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 ZC3H10Q96K80 434 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 SPACA7Q96KW9 195 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 PRICKLE1Q96MT3 831 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 SLC2A13Q96QE2 648 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 ACOX2Q99424 681 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 GABRG3Q99928 467 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 DDX50Q9BQ39 737 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 NAT10Q9H0A0 1025 aaKnown RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 HSD3B7Q9H2F3 369 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 FAM204AQ9H8W3 233 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 PARD6AQ9NPB6 346 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 FAM207AQ9NSI2 230 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 CACNA2D2Q9NY47 1150 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 CLEC4EQ9ULY5 219 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 SIK3Q9Y2K2 1263 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 FRYLO94915 3013 aa11.36□□□□□ -0.59
PPP4R1-208ENST00000578178 WDR87Q6ZQQ6 2873 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 A0A1W2PQF6 199 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 DCLK1O15075 740 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 EPHB6O15197 1021 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 LSM8O95777 96 aaKnown RBP11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 MOCS2O96007 188 aaPredicted RBP11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 TGM1P22735 817 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 HLA-FP30511 346 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 SLC6A4P31645 630 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 GBP1P32455 592 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 SGSHP51688 502 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 POLR2FP61218 127 aaKnown RBP11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 PITX1P78337 314 aaPredicted RBP11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 CDK17Q00537 523 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 LMNB2Q03252 620 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 SYCP1Q15431 976 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 DCAF6Q58WW2 860 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 MPP7Q5T2T1 576 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 PIK3R6Q5UE93 754 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 TAF3Q5VWG9 929 aa11.35□□□□□ -0.59
PPP4R1-208ENST00000578178 RNF43Q68DV7 783 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms