RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 FBXL6Q8N531 539 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 PGAP3Q96FM1 320 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 TBCBQ99426 244 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 NELL2Q99435 816 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 SELENOOQ9BVL4 669 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 FAM204AQ9H8W3 233 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 LTB4R2Q9NPC1 389 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 PIGVQ9NUD9 493 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 MARK1Q9P0L2 795 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 COX16Q9P0S2 106 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 XPO7Q9UIA9 1087 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 STAP1Q9ULZ2 295 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 SIT1Q9Y3P8 196 aa12.42□□□□□ -0.42
RABGGTA-218ENST00000560777 HOXC11O43248 304 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 ACSL4O60488 711 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 ENDOD1O94919 500 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 F9P00740 461 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 AOC1P19801 751 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 CDC25BP30305 580 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 CCR1P32246 355 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 OPRD1P41143 372 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 SLC11A2P49281 568 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 CXCR3P49682 368 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 SULT1E1P49888 294 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 ATXN1P54253 815 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 DEUP1Q05D60 604 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 GFPT1Q06210 699 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 PPP2R5DQ14738 602 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 UBXN2BQ14CS0 331 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 SLC18A3Q16572 532 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 RAB6CQ53S08 254 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 TMEM196Q5HYL7 178 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 CCDC122Q5T0U0 273 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 SH3PXD2AQ5TCZ1 1133 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 NADSYN1Q6IA69 706 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 DNAJC24Q6P3W2 148 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 C12orf40Q86WS4 652 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 ETFBKMTQ8IXQ9 262 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 NAT16Q8N8M0 369 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 PJA1Q8NG27 643 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 P2RY13Q9BPV8 354 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 BBS2Q9BXC9 721 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 OSBPL6Q9BZF3 934 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 RAB6CQ9H0N0 254 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 NHEJ1Q9H9Q4 299 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 PARVAQ9NVD7 372 aa12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 CNOT8Q9UFF9 292 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 NDRG2Q9UN36 371 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 MRPS17Q9Y2R5 130 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-218ENST00000560777 NEDD8-MDP1E9PL57 170 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 I6L893 689 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 ATMINO43313 823 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 TSPAN3O60637 253 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 MOCS2O96007 188 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 PENKP01210 267 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 APOEP02649 317 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 MYBL1P10243 752 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 SLC2A3P11169 496 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 CHRNB1P11230 501 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 TYRP14679 529 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 AVPR2P30518 371 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 SDC4P31431 198 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 SLC6A4P31645 630 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 PTPN9P43378 593 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 ATP11AP98196 1134 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 MESP2Q0VG99 397 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 C15orf59Q2T9L4 293 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 PIK3R6Q5UE93 754 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 FYB2Q5VWT5 728 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 FSTL4Q6MZW2 842 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 RFWD3Q6PCD5 774 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 CCDC105Q8IYK2 499 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 TMEM105Q8N8V8 129 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 CENPIQ92674 756 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 CD101Q93033 1021 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 RNF34Q969K3 372 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 CLDN23Q96B33 292 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 ZNF653Q96CK0 615 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 BTN2A3PQ96KV6 586 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 CCDC42Q96M95 316 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 MCEEQ96PE7 176 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 THAP2Q9H0W7 228 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 WDCPQ9H6R7 721 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 LMAN1LQ9HAT1 526 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 ANLNQ9NQW6 1124 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 PLK2Q9NYY3 685 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 DLGAP2Q9P1A6 1054 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 SLC12A6Q9UHW9 1150 aa12.4□□□□□ -0.42
RABGGTA-218ENST00000560777 A0A0A0MRY4 1105 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 TMEM191CA6NGB0 347 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 AKR1B10O60218 316 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 CACNG3O60359 315 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 TULP3O75386 442 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 DCNP07585 359 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 CISD3P0C7P0 127 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 ABCB4P21439 1286 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 GPD1P21695 349 aa12.39□□□□□ -0.43
RABGGTA-218ENST00000560777 EIF2DP41214 584 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms