RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 FKBP6O75344 327 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 SERPINA6P08185 405 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 ZNF286BP0CG31 522 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 GRIA1P42261 906 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 TAP1Q03518 808 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 CAPSQ13938 189 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 MPP5Q8N3R9 675 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 NME8Q8N427 588 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 FAM172AQ8WUF8 416 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 TMEM165Q9HC07 324 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 GALNT8Q9NY28 637 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 BPGMP07738 259 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 GRIA2P42262 883 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 MAP7Q14244 749 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 PDK3Q15120 406 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 RNF111Q6ZNA4 994 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 NETO2Q8NC67 525 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 ICA1LQ8NDH6 482 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 ACSS2Q9NR19 701 aa12.75□□□□□ -0.37
HDAC7-230ENST00000552960 DDX43Q9NXZ2 648 aaKnown RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 MAGED2Q9UNF1 606 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-230ENST00000552960 MYOCOSA0A1B0GUC4 107 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 H0YCG3 227 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 HNRNPRO43390 633 aaKnown RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 DCXO43602 365 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 BUD23O43709 281 aaKnown RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 TRPA1O75762 1119 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 ERBB2P04626 1255 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 F7P08709 466 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 UQCRBP14927 111 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 CLCN3P51790 818 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 BCAR1P56945 870 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 CLDN10P78369 228 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 TARBP2Q15633 366 aaKnown RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 OR6B2Q6IFH4 312 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 IYDQ6PHW0 289 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 UNC5AQ6ZN44 842 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 PDSS2Q86YH6 399 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 RNF148Q8N7C7 305 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 NAT14Q8WUY8 206 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 CNTNAP2Q9UHC6 1331 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 E9PBE3 544 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 M0QYV0 167 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 ADCY3O60266 1144 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 KLHL41O60662 606 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 APOEP02649 317 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 HMGCRP04035 888 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 VAV1P15498 845 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 PDGFRAP16234 1089 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 EIF4BP23588 611 aaKnown RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 YWHAEP62258 255 aaKnown RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 KCNJ11Q14654 390 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 DUOXA2Q1HG44 320 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 SPRYD7Q5W111 196 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 MAMDC4Q6UXC1 1216 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 PIWIL2Q8TC59 973 aaKnown RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 PPP4R1Q8TF05 950 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 KLC2Q9H0B6 622 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 RSAD1Q9HA92 442 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 THAP1Q9NVV9 213 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 CHCHD3Q9NX63 227 aaKnown RBP12.74□□□□□ -0.37
HDAC7-230ENST00000552960 APPL1Q9UKG1 709 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 AK5Q9Y6K8 562 aa12.74□□□□□ -0.37
HDAC7-230ENST00000552960 KLF11O14901 512 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 CFLARO15519 480 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 PRPSAP2O60256 369 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 DKC1O60832 514 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SIN3BO75182 1162 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 PTPN7P35236 360 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 ARL2P36404 184 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SLC1A6P48664 564 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 ZNF132P52740 706 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 HUNKP57058 714 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 TMCO4Q5TGY1 634 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 TAPT1Q6NXT6 567 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SDCCAG8Q86SQ7 713 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-230ENST00000552960 PEBP4Q96S96 227 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 MROH8Q9H579 483 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SIRPGQ9P1W8 387 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 TRUB2O95900 331 aaKnown RBP12.73□□□□□ -0.37
HDAC7-230ENST00000552960 RGS7P49802 495 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SESN2P58004 480 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-230ENST00000552960 FOLH1Q04609 750 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 MSLNQ13421 630 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-230ENST00000552960 TEX44Q53QW1 395 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 CAND1Q86VP6 1230 aaKnown RBP12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SNRNP27Q8WVK2 155 aaKnown RBP12.73□□□□□ -0.37
HDAC7-230ENST00000552960 PGBD4Q96DM1 585 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 ZIC5Q96T25 663 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 PAK5Q9P286 719 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 CDH22Q9UJ99 828 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 INPP5FQ9Y2H2 1132 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SLC4A7Q9Y6M7 1214 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SDR42E2A6NKP2 422 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 AIM2O14862 343 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SPAG6O75602 509 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SNAI1O95863 264 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms