RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 SLC13A1Q9BZW2 595 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 CRISPLD2Q9H0B8 497 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 GPAMQ9HCL2 828 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 SLC7A8Q9UHI5 535 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 CPSF3Q9UKF6 684 aaKnown RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 HBS1LQ9Y450 684 aaKnown RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 BRCA2P51587 3418 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 CYB561D2O14569 222 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 SNNO75324 88 aaPredicted RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 TNNC2P02585 160 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 SERPINA6P08185 405 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 UBTFL6P0CB48 400 aaPredicted RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 KITP10721 976 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 ALDH18A1P54886 795 aaKnown RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 C1orf146Q5VVC0 180 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 MTHFD1LQ6UB35 978 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 KYAT3Q6YP21 454 aaKnown RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 ARRDC4Q8NCT1 418 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 MCRS1Q96EZ8 462 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 RILPQ96NA2 401 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 PEBP4Q96S96 227 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 SDCBP2Q9H190 292 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 C1orf21Q9H246 121 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 SMARCAD1Q9H4L7 1026 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 ZNF395Q9H8N7 513 aaPredicted RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 USP29Q9HBJ7 922 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDB1-224ENST00000545894 MARCOQ9UEW3 520 aaPredicted RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 PRR5-ARHGAP8B1AHC4 643 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 BIRC5O15392 142 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 KCNN4O15554 427 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 APOEP02649 317 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 ASGR1P07306 291 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 BPGMP07738 259 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 LYNP07948 512 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 CRABP2P29373 138 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 RAP1GAPP47736 663 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 GJA8P48165 433 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 POLE2P56282 527 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 ARHGAP8P85298 464 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 WASHC5Q12768 1159 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 BIRC2Q13490 618 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 BMPR2Q13873 1038 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 TMCO4Q5TGY1 634 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 FAM160B1Q5W0V3 765 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 C1orf228Q6PIY5 440 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 CXCL17Q6UXB2 119 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 RTP4Q96DX8 246 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 ACO2Q99798 780 aaKnown RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 ADPGKQ9BRR6 497 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 KLC2Q9H0B6 622 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 PLAC1Q9HBJ0 212 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 SMYD2Q9NRG4 433 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 ANKRD33BA6NCL7 494 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 H3BRB1 525 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 KPNA6O60684 536 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 FKBP6O75344 327 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 BAG2O95816 211 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 CRHR1P34998 444 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 GABRB2P47870 512 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 ZNF143P52747 638 aaPredicted RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 STX3Q13277 289 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 TARBP2Q15633 366 aaKnown RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 FAM102AQ5T9C2 384 aaPredicted RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 ARCQ7LC44 396 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 CAND1Q86VP6 1230 aaKnown RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 CCNJLQ8IV13 435 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 NDUFAF2Q8N183 169 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 PPP1R13LQ8WUF5 828 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 PRPF31Q8WWY3 499 aaKnown RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 LRRC39Q96DD0 335 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 ANKRD36BP1Q96IX9 119 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 TTC1Q99614 292 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 TSEN34Q9BSV6 310 aaKnown RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 CCDC28BQ9BUN5 200 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 RNPEPQ9H4A4 650 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 TUT1Q9H6E5 874 aaKnown RBP11.85□□□□□ -0.51
DDB1-224ENST00000545894 NRBP2Q9NSY0 501 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 PCMTD2Q9NV79 361 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 SORCS3Q9UPU3 1222 aa11.85□□□□□ -0.51
DDB1-224ENST00000545894 UGT1A9O60656 530 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 AP1G2O75843 785 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 F2P00734 622 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 CSH1P0DML2 217 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 CSH2P0DML3 217 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 AOC1P19801 751 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 GPD1P21695 349 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 MAGEA6P43360 314 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 ACLYP53396 1101 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 ZNF667Q5HYK9 610 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 FAXCQ5TGI0 409 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 PCSK9Q8NBP7 692 aaKnown RBP11.84□□□□□ -0.51
DDB1-224ENST00000545894 RNF157Q96PX1 679 aa11.84□□□□□ -0.51
DDB1-224ENST00000545894 SIKE1Q9BRV8 207 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms