RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 DVL3Q92997 716 aaPredicted RBP2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 CD101Q93033 1021 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 MKL1Q969V6 931 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 RSPRY1Q96DX4 576 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 ERLEC1Q96DZ1 483 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 CHFRQ96EP1 664 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 DYNLL2Q96FJ2 89 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 PRR11Q96HE9 360 aaPredicted RBP2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 DHRS1Q96LJ7 313 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 RMDN3Q96TC7 470 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 DSCC1Q9BVC3 393 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 COLEC11Q9BWP8 271 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 C1QTNF3Q9BXJ4 246 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 MAF1Q9H063 256 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 RRN3Q9NYV6 651 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 ERAP1Q9NZ08 941 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 REV1Q9UBZ9 1251 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 SYNPO2Q9UMS6 1093 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 TP53TG5Q9Y2B4 290 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 PRG3Q9Y2Y8 225 aaPredicted RBP2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 PCDHB5Q9Y5E4 795 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 PCDHGA7Q9Y5G6 932 aa2.43□□□□□ -2.02
TRAV1-1-201ENST00000542354 PTPRDP23468 1912 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CNTRLQ7Z7A1 2325 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 HYDINQ4G0P3 5121 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 A0A1B0GTQ1 180 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 SHISA3A0PJX4 238 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 TMEM82A0PJX8 343 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 ANKUB1A6NFN9 424 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 MKRN2OSH3BPM6 223 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 YKT6O15498 198 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 PHF1O43189 567 aaPredicted RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 LRRTM2O43300 516 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZG16O60844 167 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CRLF1O75462 422 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CIAO1O76071 339 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CNTN5O94779 1100 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 DDHD2O94830 711 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 EFEMP2O95967 443 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 FSHBP01225 129 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 MYL4P12829 197 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 HNRNPLP14866 589 aaKnown RBP eCLIP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 TNFRSF1AP19438 455 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 TFE3P19532 575 aaPredicted RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 WT1P19544 449 aaPredicted RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 TACR2P21452 398 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 UBA1P22314 1058 aaKnown RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 DDX6P26196 483 aaKnown RBP eCLIP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 U2AF2P26368 475 aaKnown RBP eCLIP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CHMLP26374 656 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 HTR1EP28566 365 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLC5A2P31639 672 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 DNAJA1P31689 397 aaKnown RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 ELF1P32519 619 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CCR2P41597 374 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLC1A4P43007 532 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 POU4F1Q01851 419 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 FOLH1Q04609 750 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 RAB33AQ14088 237 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 NEDD9Q14511 834 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZNF630Q2M218 657 aaPredicted RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 KIAA0895LQ68EN5 471 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 BICRALQ6AI39 1079 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 METTL7BQ6UX53 244 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 C16orf47Q6ZP98 133 aaPredicted RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 PARS2Q7L3T8 475 aaKnown RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 G2E3Q7L622 706 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 VASH2Q86V25 355 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 AMOTL1Q8IY63 956 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CCDC13Q8IYE1 715 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CARFQ8N187 725 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 NXPE1Q8N323 547 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 MIGA1Q8NAN2 632 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 TXNDC5Q8NBS9 432 aaKnown RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 SGMS2Q8NHU3 365 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 RNF34Q969K3 372 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 RRP36Q96EU6 259 aaKnown RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 PEX11GQ96HA9 241 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 SUCLG2Q96I99 432 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 B3GALT6Q96L58 329 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZNF512Q96ME7 567 aaPredicted RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 LRRC3BQ96PB8 259 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 TAAR1Q96RJ0 339 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 MENTQ9BUN1 341 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 MKRN2Q9H000 416 aaKnown RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 EBF3Q9H4W6 596 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 BICC1Q9H694 974 aaKnown RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 EPB41L4AQ9HCS5 686 aaPredicted RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 MRS2Q9HD23 443 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 SPHK2Q9NRA0 654 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 GJB4Q9NTQ9 266 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 ECHDC1Q9NTX5 307 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CALCOCO1Q9P1Z2 691 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 KCND3Q9UK17 655 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 TBX20Q9UMR3 447 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 SF3B6Q9Y3B4 125 aaKnown RBP2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 DAAM1Q9Y4D1 1078 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 PCDHA1Q9Y5I3 950 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 CROCCQ5TZA2 2017 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 PLXND1Q9Y4D7 1925 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 438.1 ms