RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TLK2Q86UE8 772 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 MANSC1Q9H8J5 431 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 ANLNQ9NQW6 1124 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 TMEM30AQ9NV96 361 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 PAK5Q9P286 719 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 COL1A2P08123 1366 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 USP12O75317 370 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 ALDH3A1P30838 453 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 SULT1E1P49888 294 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 MFSD10Q14728 455 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 WSCD1Q658N2 575 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 NCBP2-AS2Q69YL0 99 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 ZCCHC23Q6ZST2 131 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 FAM13CQ8NE31 585 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 ZC3H15Q8WU90 426 aaKnown RBP15.26■□□□□ 0.03
DDX55-209ENST00000542286 ITFG2Q969R8 447 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 KCNK16Q96T55 309 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 PAAF1Q9BRP4 392 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 ZCWPW1Q9H0M4 648 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 PCMTD2Q9NV79 361 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 DLGAP2Q9P1A6 1054 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 WDR27A2RRH5 827 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 FAM72CH0Y354 149 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 PTDSS1P48651 473 aaKnown RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 CACNA2D1P54289 1103 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 BST2Q10589 180 aaKnown RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 LAMB3Q13751 1172 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 PDK2Q15119 407 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 MDH1BQ5I0G3 518 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 FAM72AQ5TYM5 149 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 RNF220Q5VTB9 566 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 FAM72DQ6L9T8 149 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 LONP2Q86WA8 852 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 FAM72BQ86X60 149 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 APLFQ8IW19 511 aaPredicted RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 ADGRF2Q8IZF7 708 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 PDCD7Q8N8D1 485 aaKnown RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 ANKRD52Q8NB46 1076 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 DRAXINQ8NBI3 349 aaPredicted RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 ZFAND2BQ8WV99 257 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 DNAJC9Q8WXX5 260 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 LRMDAQ9H2I8 198 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 SENP1Q9P0U3 644 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 IPPQ9Y573 584 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 HMX2A2RU54 273 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 MYADML2A6NDP7 307 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 I6L893 689 aaPredicted RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 KCNK1O00180 336 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 PIRO00625 290 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 DPYSL4O14531 572 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 CHADO15335 359 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 STRNO43815 780 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 SP100P23497 879 aaPredicted RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 EPHB2P29323 1055 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 ABCG1P45844 678 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 MAP3K7CLP57077 242 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 CCDC15Q0P6D6 951 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 AP1B1Q10567 949 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 OTUD1Q5VV17 481 aaPredicted RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 TWF2Q6IBS0 349 aaKnown RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 SH2D5Q6ZV89 423 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 SMG8Q8ND04 991 aaKnown RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 APPL2Q8NEU8 664 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 SRPK1Q96SB4 655 aaKnown RBP15.25■□□□□ 0.03
DDX55-209ENST00000542286 KLC2Q9H0B6 622 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 ARMCX1Q9P291 453 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 KIAA1257Q9ULG3 409 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 USH1CQ9Y6N9 552 aa15.25■□□□□ 0.03
DDX55-209ENST00000542286 FAM237BA0A1B0GVD1 139 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 NRP1O14786 923 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 ZWINTO95229 277 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 LILRA4P59901 499 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 ARMC3Q5W041 872 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 C16orf46Q6P387 395 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 GPRIN1Q7Z2K8 1008 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.24■□□□□ 0.03
DDX55-209ENST00000542286 CCNYQ8ND76 341 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 AGAP3Q96P47 875 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 FRMD8P1Q9BZ68 369 aaPredicted RBP15.24■□□□□ 0.03
DDX55-209ENST00000542286 CCDC78A2IDD5 438 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 CFAP69A5D8W1 941 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 GLTPD2A6NH11 291 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 STAU1O95793 577 aaKnown RBP15.24■□□□□ 0.03
DDX55-209ENST00000542286 F2P00734 622 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 ACADSP16219 412 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 TGM2P21980 687 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 ETV4P43268 484 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 PGGT1BP53609 377 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 MRPS5P82675 430 aaKnown RBP15.24■□□□□ 0.03
DDX55-209ENST00000542286 SETDB1Q15047 1291 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 TSNAXIP1Q2TAA8 658 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 TBC1D25Q3MII6 688 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 CMPK2Q5EBM0 449 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 PAQR9Q6ZVX9 377 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 SPNS2Q8IVW8 549 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 NME8Q8N427 588 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 ATXN7L3BQ96GX2 97 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 SIGLEC10Q96LC7 697 aa15.24■□□□□ 0.03
DDX55-209ENST00000542286 C11orf84Q9BUA3 381 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms