RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 XKR4Q5GH76 650 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 HEATR6Q6AI08 1181 aaKnown RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 C16orf46Q6P387 395 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 CES3Q6UWW8 571 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 LIMS2Q7Z4I7 341 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 CDKL3Q8IVW4 592 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 ADAM32Q8TC27 787 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 STK32AQ8WU08 396 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 C20orf27Q9GZN8 174 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 PNPLA8Q9NP80 782 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 MAGED2Q9UNF1 606 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-214ENST00000540113 C15orf41Q9Y2V0 281 aa11.9□□□□□ -0.5
C11orf54-214ENST00000540113 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 KRT37O76014 449 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 MYL3P08590 195 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 DLDP09622 509 aaKnown RBP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 PRKCHP24723 683 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 AP1B1Q10567 949 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 PCBP1Q15365 356 aaKnown RBP eCLIP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 ANKRD20A2Q5SQ80 823 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 ANKRD20A1Q5TYW2 823 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 ANKRD20A3Q5VUR7 823 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 TLDC1Q6P9B6 456 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 HFE2Q6ZVN8 426 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 SLC26A9Q7LBE3 791 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 PIGZQ86VD9 579 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 NDUFAF2Q8N183 169 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 CRYBG2Q8N1P7 616 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 DEPDC1BQ8WUY9 529 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 EBNA1BP2Q99848 306 aaKnown RBP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 MEIS3P2A8K0S8 358 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 GCATO75600 419 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 HAUS5O94927 633 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 AMHP03971 560 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 KCNE1P15382 129 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 AXLP30530 894 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 PTPN9P43378 593 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 RPL34P49207 117 aaKnown RBP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 BCAT1P54687 386 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 TMPRSS15P98073 1019 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 BST1Q10588 318 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 CHI3L2Q15782 390 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 NBPF20Q3BBV1 942 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 SYPL2Q5VXT5 272 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 RINLQ6ZS11 566 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 CCNYQ8ND76 341 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 CENPIQ92674 756 aaPredicted RBP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 OXNAD1Q96HP4 312 aaPredicted RBP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 QKIQ96PU8 341 aaKnown RBP eCLIP11.89□□□□□ -0.516e-11■■■■■ 40.2
C11orf54-214ENST00000540113 GDAP2Q9NXN4 497 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 NOP53Q9NZM5 478 aaKnown RBP11.89□□□□□ -0.51
C11orf54-214ENST00000540113 PLLPQ9Y342 182 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 IPPQ9Y573 584 aa11.89□□□□□ -0.51
C11orf54-214ENST00000540113 TRPM7Q96QT4 1865 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 PEX11AO75192 247 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 SPAG6O75602 509 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ATP5HO75947 161 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 DESP17661 470 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 YY1P25490 414 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ELF1P32519 619 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ERFP50548 548 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 PARP6Q2NL67 630 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 HSF5Q4G112 596 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-214ENST00000540113 OTUD1Q5VV17 481 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-214ENST00000540113 CHSY1Q86X52 802 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 COLGALT1Q8NBJ5 622 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 RNF169Q8NCN4 708 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 APPL2Q8NEU8 664 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 GSDMBQ8TAX9 411 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 HTR3CQ8WXA8 447 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 INPP5DQ92835 1189 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ZNF570Q96NI8 536 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 CADM1Q9BY67 442 aaKnown RBP11.88□□□□□ -0.51
C11orf54-214ENST00000540113 DENND2DQ9H6A0 471 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-214ENST00000540113 TIMM13Q9Y5L4 95 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-214ENST00000540113 USP3Q9Y6I4 520 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 CD4P01730 458 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 MGAT1P26572 445 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 PTPN4P29074 926 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 MAGEA3P43357 314 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 HUNKP57058 714 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 CDK16Q00536 496 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 RFX8Q6ZV50 586 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ZDHHC17Q8IUH5 632 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ARID3BQ8IVW6 561 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ADGRF2Q8IZF7 708 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 NME8Q8N427 588 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 TFB1MQ8WVM0 346 aaKnown RBP11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ZNF560Q96MR9 790 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 ARHGEF4Q9NR80 690 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 FZD10Q9ULW2 581 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 PSAT1Q9Y617 370 aa11.88□□□□□ -0.51
C11orf54-214ENST00000540113 FAM159BA6NKW6 160 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 FAM72CH0Y354 149 aa11.87□□□□□ -0.51
C11orf54-214ENST00000540113 PTGESO14684 152 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms