RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 RGS18Q9NS28 235 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 DNAJC17Q9NVM6 304 aaKnown RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 NKX1-2Q9UD57 310 aaPredicted RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 FARP1Q9Y4F1 1045 aaPredicted RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 NME7Q9Y5B8 376 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 SARNPP82979 210 aaKnown RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 TLE2Q04725 743 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 FAAP100Q0VG06 881 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 GPNMBQ14956 572 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 SLC1A5Q15758 541 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 CCDC6Q16204 474 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 KCTD19Q17RG1 926 aaPredicted RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 CTC1Q2NKJ3 1217 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 RTN4RL1Q86UN2 441 aaPredicted RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 MAP7D3Q8IWC1 876 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 ARHGAP18Q8N392 663 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.93■□□□□ 0.62
SDC2-202ENST00000518385 TEKT4Q8WW24 435 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 PGBD4Q96DM1 585 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 DENND2DQ9H6A0 471 aaPredicted RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 FAM49BQ9NUQ9 324 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 SCOCQ9UIL1 159 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 BRCA2P51587 3418 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 CYB561D2O14569 222 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 GABRDO14764 452 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 MAGEC1O60732 1142 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 NBNO60934 754 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 ENDOD1O94919 500 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 FGFR1P11362 822 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 KRT10P13645 584 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 IL1R2P27930 398 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 EPHB2P29323 1055 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 PTPN9P43378 593 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 LHX1P48742 406 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 CDK16Q00536 496 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 SLC34A1Q06495 639 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 KPNB1Q14974 876 aaKnown RBP18.92■□□□□ 0.62
SDC2-202ENST00000518385 PDK2Q15119 407 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 LLGL1Q15334 1064 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 DBN1Q16643 649 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 TRIM60Q495X7 471 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 TXNRD3NBQ6F5E7 133 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 SLC30A9Q6PML9 568 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 AGMOQ6ZNB7 445 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 SLC26A9Q7LBE3 791 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 KCTD6Q8NC69 237 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 SLC35B2Q8TB61 432 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 RAB3IL1Q8TBN0 382 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 PYROXD1Q8WU10 500 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 PTCD3Q96EY7 689 aaKnown RBP18.92■□□□□ 0.62
SDC2-202ENST00000518385 TSC22D3Q99576 134 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 MANSC1Q9H8J5 431 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 ZWILCHQ9H900 591 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 RNF19AQ9NV58 838 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.92■□□□□ 0.626e-10■■■□□ 18.4
SDC2-202ENST00000518385 STX18Q9P2W9 335 aaKnown RBP18.92■□□□□ 0.62
SDC2-202ENST00000518385 RABGEF1Q9UJ41 708 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 ANGPTL2Q9UKU9 493 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 DNPEPQ9ULA0 475 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 ASB3Q9Y575 518 aa18.92■□□□□ 0.62
SDC2-202ENST00000518385 MEIS3P2A8K0S8 358 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 ZNF487B1APH4 448 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 XPO1O14980 1071 aaKnown RBP18.91■□□□□ 0.62
SDC2-202ENST00000518385 PRPSAP2O60256 369 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 PDGFRBP09619 1106 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 DHRS4L1P0CG22 281 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 SDC4P31431 198 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 RAP1GDS1P52306 607 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 ARFIP2P53365 341 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 FAM189BP81408 668 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 MXRA7P84157 204 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 ROR2Q01974 943 aaKnown RBP18.91■□□□□ 0.62
SDC2-202ENST00000518385 PDIA2Q13087 525 aaKnown RBP18.91■□□□□ 0.62
SDC2-202ENST00000518385 AP1ARQ63HQ0 302 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 KAZNQ674X7 775 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 NAIF1Q69YI7 327 aaPredicted RBP18.91■□□□□ 0.62
SDC2-202ENST00000518385 ZBED8Q8IZ13 594 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 BANPQ8N9N5 519 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 B3GALNT2Q8NCR0 500 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 GSTCDQ8NEC7 633 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 LPPQ93052 612 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 NR1H4Q96RI1 486 aaPredicted RBP18.91■□□□□ 0.62
SDC2-202ENST00000518385 FTHL17Q9BXU8 183 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 C11orf49Q9H6J7 331 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 PDP2Q9P2J9 529 aa18.91■□□□□ 0.62
SDC2-202ENST00000518385 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.9■□□□□ 0.62
SDC2-202ENST00000518385 C9IYK1 514 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 PAPSS1O43252 624 aaPredicted RBP18.9■□□□□ 0.62
SDC2-202ENST00000518385 KRT4P19013 534 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 LMO2P25791 158 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 RGS7P49802 495 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 TFDP2Q14188 446 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 PLEKHG4Q58EX7 1191 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 EFHC1Q5JVL4 640 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 C6orf163Q5TEZ5 329 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 ZNF598Q86UK7 904 aaKnown RBP18.9■□□□□ 0.62
SDC2-202ENST00000518385 STMN2Q93045 179 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 FAM136AQ96C01 138 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 ZFP42Q96MM3 310 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 GAD1Q99259 594 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms