RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 MAP3K20Q9NYL2 800 aaKnown RBP4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 FEM1BQ9UK73 627 aa4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 PNMA2Q9UL42 364 aa4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 CAPN11Q9UMQ6 739 aa4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 ATP11BQ9Y2G3 1177 aa4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 PPP2R2CQ9Y2T4 447 aa4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 NUMBLQ9Y6R0 609 aa4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 A0A0G2JMZ2 1700 aa4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 SIP14410 1827 aa4.79□□□□□ -1.64
UBE2D3-230ENST00000510599 OTOFQ9HC10 1997 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 FRMD3A2A2Y4 597 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 TRIM49BA6NDI0 452 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 GCOM1H8Y6P7 765 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 WNT10BO00744 389 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 SLU7O95391 586 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 GNA14O95837 355 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 IGLV2-14P01704 120 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 GYPCP04921 128 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 CFIP05156 583 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 PLA2G4BP0C869 781 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 POLR2MP0CAP2 368 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 CASP14P31944 242 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 CCT6AP40227 531 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 KPNA1P52294 538 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 CDK17Q00537 523 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 DSG1Q02413 1049 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 UBXN1Q04323 297 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 IKQ13123 557 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 TUBB2AQ13885 445 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 SHROOM1Q2M3G4 852 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 SPDYE7PQ495Y7 208 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 C19orf54Q5BKX5 351 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 USP17L6PQ6QN14 398 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 CYP26C1Q6V0L0 522 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 BHLHA9Q7RTU4 235 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 DEFB132Q7Z7B7 95 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 ZC3H3Q8IXZ2 948 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 MYOCDQ8IZQ8 938 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 SYT2Q8N9I0 419 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 KIAA0895Q8NCT3 520 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 OR8K1Q8NGG5 319 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 ANKRD7Q92527 254 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 LPAR1Q92633 364 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 ERO1AQ96HE7 468 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 ERGIC2Q96RQ1 377 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 NUP88Q99567 741 aaPredicted RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 P2RX7Q99572 595 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 TSG101Q99816 390 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 TUBGCP2Q9BSJ2 902 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 TUBB2BQ9BVA1 445 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 MTFR1LQ9H019 292 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 MAF1Q9H063 256 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 TAOK3Q9H2K8 898 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 TUFT1Q9NNX1 390 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 ABHD10Q9NUJ1 306 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 PANK4Q9NVE7 773 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 THG1LQ9NWX6 298 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 TAB2Q9NYJ8 693 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 MYO1AQ9UBC5 1043 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 MRPL11Q9Y3B7 192 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 CD2APQ9Y5K6 639 aa4.78□□□□□ -1.64
UBE2D3-230ENST00000510599 IGLV3-22A0A075B6J6 115 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 CLRN2A0PK11 232 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 PRSS38A1L453 326 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 ZNF891A8MT65 544 aaPredicted RBP4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 FAM86B1E9PN63 330 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 WDR46O15213 610 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 MSH4O15457 936 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 TGM5O43548 720 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 KPNA6O60684 536 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 EYA4O95677 639 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 GASTP01350 101 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 FAM86B2P0C5J1 330 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 FCER1AP12319 257 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 CYP11B2P19099 503 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 HNRNPH3P31942 346 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 KRT9P35527 623 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 MTIF2P46199 727 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 FXR1P51114 621 aaKnown RBP eCLIP4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 SLC12A3P55017 1021 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 TUBB4BP68371 445 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 PHC1P78364 1004 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 ZBED6P86452 979 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 FKBP3Q00688 224 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 SETQ01105 290 aaPredicted RBP4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 NHLH1Q02575 133 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 COASYQ13057 564 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 PABPC4Q13310 644 aaKnown RBP eCLIP4.77□□□□□ -1.654e-7■■■■□ 24.1
UBE2D3-230ENST00000510599 PPP2R5CQ13362 524 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 SQSTM1Q13501 440 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 MEA1Q16626 185 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 EDRF1Q3B7T1 1238 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 USH1GQ495M9 461 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 ZCWPW2Q504Y3 356 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 FAM83BQ5T0W9 1011 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 RAD9BQ6WBX8 426 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 SYT10Q6XYQ8 523 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 MICALCLQ6ZW33 695 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 NIPA1Q7RTP0 329 aa4.77□□□□□ -1.65
UBE2D3-230ENST00000510599 KRT26Q7Z3Y9 468 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms